Gene Apre_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0016 
Symbol 
ID8396763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp20264 
End bp21226 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content39% 
IMG OID644994353 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003151792 
Protein GI257065536 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000461837 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGTT ATATAGTTAA GAGAATCATA AATTTAATAC CAGTAGCTCT GATTATATCT 
ATAATGCTTT TTGCTTTCTC TAAAGCCATG CCAGGAGATC CAATTAAGGC CATGATGCCT
ACTACAGGTC GTATGACCAA ACAAGAGCAA GAAGAGCTAT ACCAAACACT TCAAGCTAGA
TACGGACTTG ATAAGTCCTT GCCTGAGCAA TATGTAAGAT GGCTTGGAAG AACTTTGAAG
GGTGATTTGG GAGAATCTAC TAGAGTTAGA AGACCAGTTT CTGAATATTT ATCAGAGCCT
CTCAAAAACA CCATATTTTT AAATATCGGT TCGACAATTC TATCATTTGT ACTGTCGGTC
TTGATAGGAA TTAGGTCGGC CACGCACAAG GGAGGGGTTT TCGATAAGAC CTTCCAGACT
TTGACCCTAG TGGGTCTATC AATTCCTGTA TTTTTTATAG GACTTATTTT GATATTCGTC
TTTGCCTTTA GACTAGGATG GTTTCCAGCA AATGGTATGC CTAGAGAAAA TACCTTTGGA
GAATGGGTTA AGTATCTAGT TTTACCAACA GCTACCCTAA CCATAGGTTC TCTTGCATCT
CTTTCAAGAT ATGTAAGAAA CTCAATGCTA GATGCCCTAG ACCAAGATTA TATAAGAACA
GCAAGAAGTA AGGGTCTAAA AGAGAAGACT GTTATCTATT CTCATGCCTT TAGAAACGCC
CTTATACCAG TAGTTACTGC CCTAACCTGG GCTGTGCTTG GAATGTTTTC AGGTTCAGCT
ATCACAGAGA GGATATTCTC TTTTAGGGGA ATCGGTAACG AACTAATAAT GGCTGTAATG
GCTCAAGATT ACAATGTAAT CCTTGCCCTA TCAATGTTTT ATGCTGTGCT TACTCTTCTT
GGAAACTTAT TGATGGATGT GGCCTATGCC CTAGTAGATC CAAGAGTTCA ATTGGAGGCT
TAA
 
Protein sequence
MFRYIVKRII NLIPVALIIS IMLFAFSKAM PGDPIKAMMP TTGRMTKQEQ EELYQTLQAR 
YGLDKSLPEQ YVRWLGRTLK GDLGESTRVR RPVSEYLSEP LKNTIFLNIG STILSFVLSV
LIGIRSATHK GGVFDKTFQT LTLVGLSIPV FFIGLILIFV FAFRLGWFPA NGMPRENTFG
EWVKYLVLPT ATLTIGSLAS LSRYVRNSML DALDQDYIRT ARSKGLKEKT VIYSHAFRNA
LIPVVTALTW AVLGMFSGSA ITERIFSFRG IGNELIMAVM AQDYNVILAL SMFYAVLTLL
GNLLMDVAYA LVDPRVQLEA