| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0009 |
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| Symbol | |
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| ID | 8396756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | + |
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| Start bp | 9254 |
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| End bp | 10021 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644994346 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily |
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| Protein accession | YP_003151785 |
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| Protein GI | 257065529 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000498773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAGT CAAGCAAACA AGAGCACAAA GAGGCCATTC AAGAAAAATT CGAAGAGTAT
TACCAAACTC GCGACTTAAA ACTTAGGGAT GAGCTTATCA AAGAGCATAT GTATATAGTC
GATATCCTAT CCAACAAATA CGTGGGAAAG GGAATCGAAA AAGATGATCT CTACCAAGTC
GCAAGCTTAG GCTTGATCTA CGCTGTAGAA AGATACGACC CAACCAAGGG TTATGCCTTC
TCATCCTTTG CAACCCCAAC CATAATGGGA GAGCTTAAGA GATACTTCAG GGATAAGGGC
TGGGTAATAA GAGTTCCTCG AAGGATCCAG AATCTTTACA AAAAGATCAA TACAGCCAAG
AAAATCCTCC CTCAAGAGCT TCAAAGAACC CCAACCATAG CCGACATCGC TGACTATTTG
GGAGAAGATG AGGAGACAAT ACTCGAGACT ATGGAAGCAA GCAAGGTCTA TACTCCTCAA
TCCTTGGACA TGAAATATCA GGTCCAAAAG GGAGAAAACG CCATCGACTT ATCGGATATG
ATTGGAGAAG AAGATAAGAA CTTCGACTCA ATCGAGCTAA AAGATTTAAT TGATAAGTCC
AAAGAAAGAC TAAACGACCT AGAAAAAGAA ATCCTAGAAC TCAGATACTA CGAAGGAAGA
ACCCAGGTAG ACATAGCAAA TACCTTGGAC ATAAGCCAGA TGACAGTATC AAGAATTGAG
AAAAAAATAT TACAAAAATT CAGCATAGAA TTAGAAAAGA TGAAATAA
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| Protein sequence | MSKSSKQEHK EAIQEKFEEY YQTRDLKLRD ELIKEHMYIV DILSNKYVGK GIEKDDLYQV
ASLGLIYAVE RYDPTKGYAF SSFATPTIMG ELKRYFRDKG WVIRVPRRIQ NLYKKINTAK
KILPQELQRT PTIADIADYL GEDEETILET MEASKVYTPQ SLDMKYQVQK GENAIDLSDM
IGEEDKNFDS IELKDLIDKS KERLNDLEKE ILELRYYEGR TQVDIANTLD ISQMTVSRIE
KKILQKFSIE LEKMK
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