| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0403 |
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| Symbol | |
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| ID | 8413252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 465219 |
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| End bp | 466529 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645021971 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_003179425 |
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| Protein GI | 257784208 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000768069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCAGA GAATTCAAGG TACCGAAGAT CTTTACGGCG GCTATATGCG CTCGTGGGAG
CACATGCAAG ATGTTGCTCG CCATTTGTTT GGTACTTACG GTTTTGACCG CATTGAGACT
CCTGCACTTG AGCAGGTAGA TACTTTTGTT CACGGTATTG GTGAGTCAAC TGATGTTGTA
CGCAAAGAGA TGTTTCGCGT CTTTTCAGGC GCTCTGCTTG ATGACTTGCT AGCTGCTGGT
AATGAGTCCG GTCTTAAGCC TCGTCAGCGC ATGGCCATGC GCCCTGAGGG AACTGCTGGT
GTGGTTCGCG CTGCTGTTGA GCATAACTTT GTGCCACAGG GCGGAACGCC TGCAAAGCTT
TGGTATGCCG AGGCAATGTT TAGAGGGGAA CGTCCTCAGA AGGGCCGTCT GCGTCAGTTT
CACCAGGTAG GCGTTGAGTG GCTTGGAGCT TCTGATCCAG CTGCTGATGC AGAGTCCATC
ATCATGTTGA TGAAGTTTTA CGAGCAGATG GGTTTCTCGC CAGCCAATAT GAAGCTCATG
ATTAACTCTA TGGGTGATGC GGAGTGCCGT CCTGCATATC GCGAGAAGGT CAAGCAGTTC
ATTCTTGATC ACAAGGATCA GATGTGTGAG GACTGTCTTG AGCGTGCAGA GATTAATCCG
CTGCGTGCGT TTGACTGCAA AAATGAGGGT TGTCACGCGG TCATGAAAGA TGCTCCACTG
ATTTCAGACA ACCTGTGCGA TGACTGTCGC ACTCATTATG AGCAGGTCAA AGCATATTTG
GATGCTGCTG GTATTTTGTA CATTGAGGAT CCAACGCTTG TTCGAGGCCT GGATTACTAT
ACGCGCACTG TCTTTGAGGT AGAAATTCCA AACGCTGGCG TTGGTGCTAT CGGCGGTGGC
GGTCGTTACG ACGGTCTTGT TGAACTTGAA GGTGGAAAGC CAACCCCAGG CGTTGGTTTT
GCTGTTGGTT TTGAACGCAT CATGCTGGCG CTGGAGGCTC TTGGTGTTTC GGCTGAACCT
GCAGCTCCAA GCTGTGTCTA TGTTGCTTGT GCAGGTGCTG AGCAGGCTCC TGTTGTATTT
GATGCTGTAT TGGCGCTGCG TGAGGCAGGT ATTAGATGCG AGGCTGATCG TACTGGTCGT
TCGTTAAAGG CTCAGTTCAA GCAGGCAGAT AAGATGGGCG CGGCACTTTG TGTGGTTATT
GGTCCAGATG AGGTTGAAGC TGGTGTTGTA ACTCTTCGTG ATATGGAGTC TCATGAGCAG
GTACAGGTAC CTTCTGACCA GCTTGTTGCT GAGGTTAAAG CAAGACAGTA G
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| Protein sequence | MGQRIQGTED LYGGYMRSWE HMQDVARHLF GTYGFDRIET PALEQVDTFV HGIGESTDVV
RKEMFRVFSG ALLDDLLAAG NESGLKPRQR MAMRPEGTAG VVRAAVEHNF VPQGGTPAKL
WYAEAMFRGE RPQKGRLRQF HQVGVEWLGA SDPAADAESI IMLMKFYEQM GFSPANMKLM
INSMGDAECR PAYREKVKQF ILDHKDQMCE DCLERAEINP LRAFDCKNEG CHAVMKDAPL
ISDNLCDDCR THYEQVKAYL DAAGILYIED PTLVRGLDYY TRTVFEVEIP NAGVGAIGGG
GRYDGLVELE GGKPTPGVGF AVGFERIMLA LEALGVSAEP AAPSCVYVAC AGAEQAPVVF
DAVLALREAG IRCEADRTGR SLKAQFKQAD KMGAALCVVI GPDEVEAGVV TLRDMESHEQ
VQVPSDQLVA EVKARQ
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