| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0100 |
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| Symbol | |
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| ID | 8412943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 108428 |
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| End bp | 111010 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021667 |
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| Product | ATP-dependent chaperone ClpB |
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| Protein accession | YP_003179127 |
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| Protein GI | 257783910 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.373648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTAG ATAAATGGGC TGTAACCGCC CAGGAAGCAC TGCAGGCAGC TCTTGGTATT
GCTGGCGACG CAGAGGCTTC TGAGGTTACA CCAACGCACC TGCTCAAGGC GTTGTTGGAC
AGCAACGAGC GCAACCTGCG TTCTATTTTG GAGAAGATTG GCGCAGATCC TGACAGCATT
GCTACGCAGG TAGACCAGGC AATCTCCAAG GCTCCAAAGG TAAGTGGAGC ACAGATTGGC
ATTGGCAACG ACCTTCTCAA GGTTATTAAC GAGGCCGAGA AGCTTGCCAC CAAGCTGGGA
GATTCTTACG TTACCTCTGA GCATTTGCTC ACAGCGTTAG CAAACGATAA CACTGACGCA
GGTAGGATTC TTCGCGACGC CGGCATTACA GCCAAGCGTG TAGAAGAGGT GTACAACGAT
CTTCGCGGTG ATGAGCGTGT AACCTCGCAG GATGCAAAGC CACAGTTTGA GGCGTTGGAG
CAGTATGGTC GCAATGTGAC CGATCTTGCT CGTCAGGGAA AGCTTGATCC AGTTATTGGC
CGCGTCGAAG AAATTCGTCG CACCATTCAG GTTCTGAGCC GCCGCACCAA GAACAATCCT
GTTCTCATTG GCGAGCCTGG TGTTGGTAAG ACCGCAATCG TGGAAGGCCT GGCAGAACGC
ATTGTTTCTG GCGACGTTCC AAGTACCCTG CGCGATAAAG AGCTTGTTGA GCTTGACATG
TCTGCCCTGG TAGCGGGTGC AAAGTACCGT GGTGAGTTTG AGGACCGCCT GAAGAGCGTG
GTAAAAGAGG TGGCCAAGTC TAACGGCCAG ATTATTCTCT TCATTGACGA GCTCCACACC
ATCGTAGGCG CTGGTGCTTC CGAGGGCTCC ATGGACGCTG GCAACATCTT GAAGCCAGCA
CTTGCCCGTG GAGAGCTCCG TGCAATTGGT GCCACTACGC TGGATGAATA CCGCAAGTAC
ATCGAGAAGG ACGCTGCTCT TGCACGTCGT TTCCAGACCG TACTTGTCTC TGAGCCTACT
GTTGAAGATA CCATTTCTAT CTTGCGTGGC CTTAAGGAGA AGTACGAGCA GCACCACCGC
GTCCGTATTA CGGACTCCGC TTTGGTTGCA GCAGCAGACC TTTCTAACCG CTACATTTCT
GACCGATTCT TGCCAGATAA GGCGATTGAC TTGGTAGATG AGGCAGCGTC AAGACTTCGC
ATGGAGCTTG ATTCTATGCC AGCAGAGATT GATGCGGTTG ATCGTCAGCT TACTCAGATG
CAGATTGAGG AGCAGGCTCT GATGAAGGAG GAGGACGCTG CTTCCAAGGA GCGCCTGGAG
AACCTTCGCG CAGAGATTGC TACGACGCAG GAGAAGCTGG ATGGCATGAA GGCCAACTGG
CAGAACGAGC GCGGCGCAAT TGACCTGGTA CAGGACTTGA AATCCCAGAT TGAGGAAGCA
AAGACGCAGA TGGAGCGTGT GACTCGCGAG GGTAATTTAG CGCAGGCATC TGAGCTTCGT
TACAGCACTA TTCCAGAGCT TGAACGTAAA TACGATGAGG CAGAAAAGGC CCTTCTCGCC
AAGCAGGAAG ACGGCGGAAT CCTCAAGGAA GAGGTCACCA CGGACGAGAT TGCCGAGGTA
GTTTCTTCGT GGACCGGCGT GCCTGTGTCC AAGATGATGC AGGGCGAGAT GGACAAGCTC
AAGAACCTTG AGGACCAGCT TCACCTGCGC GTTATTGGTC AGGACGATGC TGTTTCCGCA
GTTGCTGCAG CGGTCCGTCG TTCTCGCGCG GGTCTGGCAG ATCCAAACAA GCCTCTGGGC
AGCTTCTTCT TCCTGGGCCC AACCGGTGTG GGCAAGACCG AGCTGGCAAA GGCGCTGGCA
GAGCTGCTGT TTGACGACGA GCGCTCGCTG ATCCGCATTG ATATGTCTGA GTACATGGAG
AAGTTCTCGG TCCAGCGACT CATTGGCGCA CCTCCAGGAT ACGTGGGTTA TGACGAGGGT
GGCCAGCTCA CCGAGGCAGT TCGTAGGCAT CCATACTCCG TCATCTTGCT GGACGAGATG
GAGAAGGCCC ATCCTGATGT CTTCAACATC TTGCTGCAGG TACTGGACGA TGGTCGACTA
ACGGACGGTC AAGGTAGGGT AGTCAGCTTC AAGAACACCA TCATTATCAT GACCAGTAAT
GTTGGTTCGC AGTTCATTGC CGGTGCTGGC GAAGAGGGTC TTACTGAAGA GTCCAGAAAG
CAAGTTATGG AGGCGCTACG TAGCTCCTTC CGCCCTGAGT TCTTGAACCG TATCGACGAC
GTGGTTGTCT TCCAGCCTTT GGGTCTTGAA GATATTGAGC GCATCGTTGA TATTCAGCTC
AAGGATGTTC GTAGTAGACT TGCTAACGAG CGCATGACGC TGGAGCTTTC TGAGGCTGCA
AAGCAGTCAC TGGCTCTTGA TGGTCTGGAT CCTGTTTATG GTGCTCGTCC TTTGAAGCGA
CTGATTCAGC GTCGCGTTGT TGACCAGGTA GCAAACTTGA TTATTGCAGG TGAGCTGTCT
GAGGGCGATA CTGTTCTGAT TGATACTGAC GAGAACGGCA ATTTGGTTGC TCGTAAGAAG
TAA
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| Protein sequence | MRLDKWAVTA QEALQAALGI AGDAEASEVT PTHLLKALLD SNERNLRSIL EKIGADPDSI
ATQVDQAISK APKVSGAQIG IGNDLLKVIN EAEKLATKLG DSYVTSEHLL TALANDNTDA
GRILRDAGIT AKRVEEVYND LRGDERVTSQ DAKPQFEALE QYGRNVTDLA RQGKLDPVIG
RVEEIRRTIQ VLSRRTKNNP VLIGEPGVGK TAIVEGLAER IVSGDVPSTL RDKELVELDM
SALVAGAKYR GEFEDRLKSV VKEVAKSNGQ IILFIDELHT IVGAGASEGS MDAGNILKPA
LARGELRAIG ATTLDEYRKY IEKDAALARR FQTVLVSEPT VEDTISILRG LKEKYEQHHR
VRITDSALVA AADLSNRYIS DRFLPDKAID LVDEAASRLR MELDSMPAEI DAVDRQLTQM
QIEEQALMKE EDAASKERLE NLRAEIATTQ EKLDGMKANW QNERGAIDLV QDLKSQIEEA
KTQMERVTRE GNLAQASELR YSTIPELERK YDEAEKALLA KQEDGGILKE EVTTDEIAEV
VSSWTGVPVS KMMQGEMDKL KNLEDQLHLR VIGQDDAVSA VAAAVRRSRA GLADPNKPLG
SFFFLGPTGV GKTELAKALA ELLFDDERSL IRIDMSEYME KFSVQRLIGA PPGYVGYDEG
GQLTEAVRRH PYSVILLDEM EKAHPDVFNI LLQVLDDGRL TDGQGRVVSF KNTIIIMTSN
VGSQFIAGAG EEGLTEESRK QVMEALRSSF RPEFLNRIDD VVVFQPLGLE DIERIVDIQL
KDVRSRLANE RMTLELSEAA KQSLALDGLD PVYGARPLKR LIQRRVVDQV ANLIIAGELS
EGDTVLIDTD ENGNLVARKK
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