Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0091 |
Symbol | |
ID | 8412934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 99356 |
End bp | 100516 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645021658 |
Product | histidine kinase |
Protein accession | YP_003179118 |
Protein GI | 257783901 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAGA TAAGTGAGAT AACCCCAAAA CCAATGCGCT CAATACGAGC TCAGCTCACC TTTCTTATGG TGGCTCTCTT AGTATGTTGC TGCGTTGTTT TAACTTGGCT TGTGTACCGC TCGACGTCTG AGCTGTTGGA ACTAGCGGCA GCTAATGCTA TCAACAAGGG AGCCCTTTCT ATTGTTTTAG ACGTAGGTGC TATTGAGCGT TCTATTTTGT TTGATGCGTT GGGCATTTTG TTCTTTGTGA TTATTGCTGG CAGCTGTGCG GCCTATCTTT TAGCAGGTCA CTATACTAAA CCAGTTCAAC AACTCTCTGC TCATATGAAA GAAATTGGTC CTGATACATT GTCTGATTCC ATTGAGATTG AGGGTGGTGG AGAAGAGGTT CAGGAGCTAG TTAAGTCATT TAATCAAATG ACTGATCAGT TAGATGAAGC GTTTGCAATG CAGAGTCGTT TTTCGGTTAG TGCGGCTCAT GAGCTTAGAA CGCCAATTGC GGTACTGCGA ACCAAACTTG ACGTTTTTAA GAAAAAGAAA CGCAAACAGA ATGAATATGA CGAGCTTGTA GATACGATGG AGACATACAT TGATCGTTTG TCTGCAATTA TCGCCAACCT GTTAGAGCTT ACGGAGACAT CTGAGCTTGG AGAGGTTGAG GACGTTTCTC TTGATGCGGT AATTACGACA GTTGTGGATG ATCTTGAACC GGTTGCTCAA AATAATATGG TCAACGTGCA GGTTAACACG CAGATTGATG CACATTCTGA TACGCCATCT GAGGCACAAA ATCTTACTGT TAAGGGAAAT GCCAATCTGT TATACCGAGC TATTTATAAT TTGGTAGAGA ATGCTATTCG CTATAACCAT AAAGAGGGAT CAGTTAACAT TGCCATGGAG ACTGAGGGCC AAGAATGCCT TGTTACAATT GCCGACACAG GAGTAGGTAT TGCGCCTGAG CAAAGAGAGC TTGTCTTTGA GCCGTTCTAC AGGGTAAATA AATCTAGGTC TAGGGAATTT GGCGGTGCGG GCATTGGTCT CTCGCTGGTT AAAACTATCT TAAAGCGACA CGGAGCTTCC ATTACAGTCT CCGAAAATAC CCCACAGGGT TCTGTGTTTA CCATTAGGAT TCCACTGGTT GATGCAATAG ACTCTGAGTA G
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Protein sequence | MIKISEITPK PMRSIRAQLT FLMVALLVCC CVVLTWLVYR STSELLELAA ANAINKGALS IVLDVGAIER SILFDALGIL FFVIIAGSCA AYLLAGHYTK PVQQLSAHMK EIGPDTLSDS IEIEGGGEEV QELVKSFNQM TDQLDEAFAM QSRFSVSAAH ELRTPIAVLR TKLDVFKKKK RKQNEYDELV DTMETYIDRL SAIIANLLEL TETSELGEVE DVSLDAVITT VVDDLEPVAQ NNMVNVQVNT QIDAHSDTPS EAQNLTVKGN ANLLYRAIYN LVENAIRYNH KEGSVNIAME TEGQECLVTI ADTGVGIAPE QRELVFEPFY RVNKSRSREF GGAGIGLSLV KTILKRHGAS ITVSENTPQG SVFTIRIPLV DAIDSE
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