Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_2011 |
Symbol | |
ID | 6275760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2443943 |
End bp | 2445049 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642614070 |
Product | alanine racemase |
Protein accession | YP_001878602 |
Protein GI | 187736490 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.146422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0449726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCAA CCAGCCCTCC CCGCGCCTGG GCCGAAATCG ACCTTGGGGC CATCCGCCAT AACCTGAATG TCGTCAAACA GGCGGCCAAA GGGGAATATT ACATGCCCGT CGTGAAGGCC GGCGCCTATG GCCACGGCCT GGAACAGGTT TGCCGCACGC TGGATTCGGA AGGCATCGCT TTCTTCGGGG TGGCCAATGT GGGAGAAGCC CGGCGCATCA GCCAGGCGGG CTGCCGCACC CGCCCTTACA TCCTGGGCCC CGCGTTCCCG GAGGAACGGG AGGAAATCGT GCTGAACGGC TGGCGCTCCT TCATTTCCAC CATGGAGGAA GCCGCGCATT ACAATTCCCT GGCGCGGCTG TACGGAAAGA CGCTGCCCAT CCACCTTTCC GTGGATACGG GAATGGGCCG CGGCGGATTC CTGCCGGACC AGCTTGAAGA ACTGCTTTCC CGCCTGGGAG AACTGGACAG CCTGCATCTG GAAGGCCTGG GCGCTCACCT TCCCTGCGCG GACGAGGACC GGGAGATTAC GCTCAGGCAA ATCTCCCGCT TTGAACAGAT GGCCGCCCGC ATCCGGGAAA AACTGCCTTT GAAGTACTGC CACCTGGCCA ACAGCGCCGC CTCCCTGGAT TATGAAATTC CCTCCAACAA CATGTGCCGC CCCGGCCTGG TGCTGTACGG TTTTTCCCCC ATTCCCTCCC CATGGGCCGC GCAATTGAAG CCGGCCATGG CCCTTTTTTC CCGCCTGACG GTGGTGCGCA CGCTGCCGGA AGGCCACGGC ATTTCCTACG GGGGTACCTT TGTGACGGAC CACCCCACCA GGGTGGCGAC CGTAGGCATA GGCTATGCGG ACGGCTACCT GCGTTCCCTG GCCCACAAGG GCGCCCGCGT CATGGTGGAC GGCGTTTCCT GCCCCCTTCT CGGGCGCGTG ACGATGGACC AGATCATGGT GGACGTCAGC CGGGCGCCGC ACGCGGAACC GGGCATGACC GCAGAAATCA TGGGGCCGCA TATCCCCGTG ACGGAACTGG CGGAAAAGGC CGGCACCATT TCCTGGGAGA TTTTTACCGG AATAGGCCCC CGGGTACCCC GCCACTACAC CCACTAA
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Protein sequence | MPATSPPRAW AEIDLGAIRH NLNVVKQAAK GEYYMPVVKA GAYGHGLEQV CRTLDSEGIA FFGVANVGEA RRISQAGCRT RPYILGPAFP EEREEIVLNG WRSFISTMEE AAHYNSLARL YGKTLPIHLS VDTGMGRGGF LPDQLEELLS RLGELDSLHL EGLGAHLPCA DEDREITLRQ ISRFEQMAAR IREKLPLKYC HLANSAASLD YEIPSNNMCR PGLVLYGFSP IPSPWAAQLK PAMALFSRLT VVRTLPEGHG ISYGGTFVTD HPTRVATVGI GYADGYLRSL AHKGARVMVD GVSCPLLGRV TMDQIMVDVS RAPHAEPGMT AEIMGPHIPV TELAEKAGTI SWEIFTGIGP RVPRHYTH
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