Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0100 |
Symbol | |
ID | 8324246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 109492 |
End bp | 110394 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644940639 |
Product | Prephenate dehydratase |
Protein accession | YP_003097920 |
Protein GI | 256374260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.863601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGCGC CCGTGCCACG CATCGCCTAC TTCGGCCCCA GGGGAACCTT CACCGAGCAG GCCGCGCGCG GCTTCGGCTC GGACCTGGAA CCCCGCGAGA CCATTCCAGC AGCCCTGGAA GCCGCCCGCA CGGGTGAGGC CGAACTCGCC TGCGTGCCGG TGGAGAACTC CGTCGAGGGC GCCGTCCCCG CGACCATGGA CGCGCTCGCC GAGGGCGCCC CCCTGATCGC CGTCGCCGAG ACCGTCCTCG CGGTCAGGTT CAGCCTGCTG GTCCGTCCGG GTGGTGGACC GGTCCGCACC GTCGCCAGCC ACCCGCACGC GCTCGCCCAG GTGCGGCACT GGCTCGCCGC GAACCTGCCC GACGCCGTCG CGGTGGCCGC GACCTCCACG GCGGCGGCGG CCGTCGCGGT GCAGCGCGGC GAGCACGACG CGGCGGTGAC CGCGCCCGTG GCGGCCGAGC ACTACCCGCT GGAGGTCGCG GCGACCGACC TCGCGGACGT GCGCGACGCC AAGACCAGGT TCCTGCTGCT GCGCGGGCCC GGAGCCCTGC CCGAGCCCAC CGGCTCCGAC CGCACCTCGG TCGTGGTGAC CGCGCCGGAC CGGGTGGGCG TGCTGTCGGA CGTGCTGGTC GAGTTCGCGC TGCGCGGCGT CAACCTGACC AGGATCGAGT CCCGGCCCAC CAAGGGCCCG CTCGGGGAGT ACCGGTTCTA CATCGACTTC GACGGCCACG TCGCCGAGCC GAGGGTGGGG GACGCGCTGG CCGCGCTGCG CAGGCACTGC CCGGACACCC GGTTCCTCGG CTCCTACCCG AAGGCCGTGC GCGAGGACGT GGTGGCGGAG AACGCGGATT TCGTGGCTGC GGCCGAGTGG GTCGTGGCGA TCAGGGAGGG CAGGGGCGCG TGA
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Protein sequence | MVAPVPRIAY FGPRGTFTEQ AARGFGSDLE PRETIPAALE AARTGEAELA CVPVENSVEG AVPATMDALA EGAPLIAVAE TVLAVRFSLL VRPGGGPVRT VASHPHALAQ VRHWLAANLP DAVAVAATST AAAAVAVQRG EHDAAVTAPV AAEHYPLEVA ATDLADVRDA KTRFLLLRGP GALPEPTGSD RTSVVVTAPD RVGVLSDVLV EFALRGVNLT RIESRPTKGP LGEYRFYIDF DGHVAEPRVG DALAALRRHC PDTRFLGSYP KAVREDVVAE NADFVAAAEW VVAIREGRGA
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