Gene Amir_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0085 
Symbol 
ID8324231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp92746 
End bp93540 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content71% 
IMG OID644940624 
ProductAbortive infection protein 
Protein accessionYP_003097905 
Protein GI256374245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGACC AGACGAGGGG GCCGGGCGAG CTCGGGCCCG AGCGGTTCAC GCCCGACCAG 
CGCAGGGGCT ACCAGGTCGA GCTGCTGCTC GTCTTCAGCG TCACCCTCGG CCTGTCCGGG
CTGCGCAGCC TGGTGCGGCT GGTGGACAGC CTGCTGCGGC CGGTCCCGCT CAACCAGCAG
ACGGTGGCGA TCAACGTCCC GCAGGCGCGG TTCGACCTGC TCGACCTGAT CGCCCAGCTG
CTGAGCGTGC TCCAGCTGTC CGCGTGGGGC GGGCTCGGCC TGTACCTGCT GTGGCGCAGC
GGGGTGACGT TCAAGGCCGT CGGCCTGGAC CGGGCCCGGC CGGTGTTCGA CGCGTGGGGC
AGCCTGGGGC TGGCCGCGCT GATCGGAATC CCCGGACTGG CGTTCTACCT CGTGGCCTGG
AACCTGGGGC TGAACCTGGC CGTGCAGCCG TCCACGCTGG ACTCCTGGTG GAGCGCGATC
ACGCTGACCC TGGCGGCGGC GGGCAACGCG TGGGCCGAGG AGGTCCTGGT CGTCGGGTTC
ATCCTGACCC GGCTGCGGCA GCTGGGGTGG AAGGACAACA CCTCGCTGGT GGTCGCTGCC
GTGCTGCGCG GCTCGTACCA CCTGTACCAG GGGTTCGGCG GGTTCATCGG CAACGTCGTG
ATGGGCCTGG TCTACGGGAG GTTCTGGCAG CGGACCGGGC GGCTGTGGCC CCTGATCGGC
GCGCACACCC TGCTCGACGT GGTCGCCTTC GTCGGCTACT CGCTGCTGCG CGACCACCTG
TCCTGGCTGC CCTGA
 
Protein sequence
MIDQTRGPGE LGPERFTPDQ RRGYQVELLL VFSVTLGLSG LRSLVRLVDS LLRPVPLNQQ 
TVAINVPQAR FDLLDLIAQL LSVLQLSAWG GLGLYLLWRS GVTFKAVGLD RARPVFDAWG
SLGLAALIGI PGLAFYLVAW NLGLNLAVQP STLDSWWSAI TLTLAAAGNA WAEEVLVVGF
ILTRLRQLGW KDNTSLVVAA VLRGSYHLYQ GFGGFIGNVV MGLVYGRFWQ RTGRLWPLIG
AHTLLDVVAF VGYSLLRDHL SWLP