Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0055 |
Symbol | |
ID | 8324200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 60861 |
End bp | 64376 |
Gene Length | 3516 bp |
Protein Length | 1171 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644940593 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003097875 |
Protein GI | 256374215 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.180545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGAGC AGCCCGTGTA CGCGGACGGG GCCGAGGACG AGGTGCTGTC CCGGCTCCGT CGCGCTGCGG ACGTCTCGGC CGGGTCGGCC GAGCTGGCCC GCGCACTGCC GTCGTGGGAG CTGATCTACC ACTTCTCGCC CCAGCGCACC GCGCTGCTCG CGCCGATCGA GCTGGTCGAG GGCACCAGGG TGCTCGACTT CGGCTGCGGC TCCGGCGTGC TGACCAGGGC GATGGGCGAG CTGGGCGCGG GCGTGGTGGG CGTCGAGGGG ACGCCGACGC GGGCCGAGGC GGCGCGGGAG CGCTGCCGGG ACCTGCCGAA CGTGCGGATC GTCGACGGCG GCGCCGAGGA GATCGGCCTG AACGGGCCGT TCGACCTGGC GCTGCTGTGC GGCGTCCTGG AGTACTCGTC GGTGTACGGC GACGGTCCCG AGGCGCTGCT GGAGGACGTG GTCGGCGCGC TGGAGCCGGG CGGCGCGCTG GTGCTGGCGA TCGAGAACAA GATCGGTCTC GGCTACCTGA CCGGCAGGCC CGAGGACCAC CACGGCAAGT CGTGGGTCGG GCTGGCGGAC TACCCGCGCG GGGGCGCCCG GACGTGGCCG CGCGCGGAGC TGGCCGAGCT GCTGGCGAAC GCGGGCCTGA CGGCCCAGCG GTGGATGCTG CCGTACCCGG ACTACAAGCT GCCCCGCGTG ATCGTGGACG CCGACGTGCA CGGCCGGGGC GACGCGGTCG ACCTGGTCGA CAAGCTGGTG CGCGACCCGC TGTACGGCGC GTTCGGCGGC ACCACCGGCG CGGTGCCCGG CCGCTCGCTG CACCGCACCG CGGTCGTGGA GGGCTTCGGG GCGTCGGTGT CGCCGTCGTT CCTGGTGGTG GCCGCGCGCA CGCCCGAGGC GGTGCGCCGG TTCGTCCGGC CGGGTCTGGG CTGGCTGGTG AACTCGGCGC GGCTGCCGCG GTGGCGGCGC TCGCGGGTGC TCACGACCGC GCTGGAGCTG CGCGCGGTCG AGGGCGCGGG CGCCGAGTCG GACTGGTTGC GCCAGGAGGC GCCCGCCGTC GAGCCGCTGC TGCCGGGGAG GCCGCTGGAC TCGCTGCTGC TGGAGGCGCT GGCGCGCGGC GACGAGGAGG AGCTGCGCGG GCTGCTCGGG CTGTGGCGGT CCTGCTGCGA GGAGGGCGCG ACCGGGCTGG GCGACCAGCC GAGGCACCCG TTCCTCCCTG GGGCGCCCGG CGTCCCGGTG CTGGCGGCGA ACGCGCTCGA CGTGCACCCC GGCAACGTGG TGCTGCTCCC GGACGGCTCG CCGAGGCGGA TCGACCTGGA GTGGTGCGCG GGCGAGGGCG TCGACGCCGA GCTGGTGCTG GTGCGGGCGC TGCTGGAGTT CGCCCGCGAG GTGCACCGCA GCGGCGCGCC GCACCCGTGG GAGGCCGAGC TGACCACGGC CGAGCTGACG CTGCGGCTGT GCGGGCTGGT CGGGCTGGCC GGTCGGGCGC GGGAGCGCTG GTCGGAGCTG CTGGCCGCCG AGGCGCGGTT GCAGGAGCTG GTCAGCGGGA CGCCGTCGGA CGAGGTGCTG ACCGCGCTGC TCGGCGACGT GGACCGGCCG GGCCCGGCGC GGGCCTGGGA GCTGCCGCCG CTGACCCAGC TCGCCGCCGC GGCGGCGGAC CGGGAGCACC TGCGCGGGGT GGCCGACGAG CTGCGCGGCG ACGTGGCCAG GGCCGAGGAC GCGCTGGACG CGACCAGGCG GCTGCGCGAG GAGGCCATGG CGGCGCTCGC CGAGGTCGAG CGGCTCCGCG AGGAGGCGAC GGCCGAGGCC GCGCACCTGC GGCGGGCGGT GGCGAAGGCG GACGAGCAGC TCGGCGACGC GCTGATGCTG GTCGCGGACG CCGAGTCGGA GCGGGTCGGC GTGGAGCGGG AGCTGGCCGA GCGGTCCTCG CGGGCCGAGG AGCTGGCGGG CGAGAACGCG CGGCTGCGGA CCGAGCTGGA CCGGCTGGCG TCGTCGAGCG TCGTGCGGGC GGGCAACCGG TACCTGTGGC CCGCCGCGCG GCTGGTGCGG GGCGCGCGGG ACCTGGCGCT GGGCCGGGGC GGCGAGGAGC CGGACCGGGT GCTGCGCGGG GTCGGCAAGG TCGCGCCGTC GGCGGTGCCG CTGCTGGCCG GGCGGGTGCG CCGGGTGAGC GAGCGGGACG CGGGGCTGCG CTACCAGCTG TCCGCGCCCT CCGAGGTGCC GGTCGGGCTG GGCCAGGTCG TCGACCTGGA CGGCTGGGCG GTGCACGACG ACCTGCCGGT GCGCGCGGTG TCGGTGGAGC TGGGCGGCCG GGTGCTCCCG GCGACCTCGG GCCACCCGAG GCCGGACGTG GCGGCGGCGC TGGGCGTGCA CGGCTGGACG GGCTTCCGGG TCCGGCTGCC GGTGCGGGCC GGCGCGGTGC GGCCGGTGCT GCTGGTGGAG CTGGCGGACG CGACGGTGCT GCGCCGCGAG CTGCCCGAGC TGGTGGGCGT GCCGCACGAG CCGGAGCCGG TCGCGGTGGA CTGGCCGGGC GAGGGCCCTC GGATCGCGGT GTGCCTGGCG ACGTACAACG CGCCGGGCGG GCACTTCCAC GAGCAGGTCC AGTCGATCAA GGAGCAGACG CACTCGAACT GGGTGTGCCT GATCAGCGAC GACGGGTCGA CCGACAAGGC CGCGCTGCGC AGCGCGACCG CCGGCGACCC CCGGTTCGTG GTGGTCGAGC ACGCCGAGAA CGTGGGCTTC TACCGGAACT TCGGGCGCGC GCTGGCCATG GTGCCGGTGG ACGCGGACCT GGTGGCGCTG TCCGACCAGG ACGACGTGTG GGACGCGGAC AAGCTGGCCG TGATGGCGGA GCGGTTCGCC GACCCGTCCG TGCAGCTGGC GTACTGCGAC ATGCGGCTGG TCGACGGCGG CGGCGCGGTG GTGGCCGAGA GCGCGTGGAC GAACCGGCCG AACCAGTGGA CCGACCTGGA GCAGCTGCTG CTGCTGAACA CGGTCACCGG CGCGGCGACC GTGCTGCGGG CCGACCTGCT GCGGGAGCGC GTGCTGCCGC TGCCGCCGGG CACCCCCGCC GCGTACCACG ACCAGTGGAT CGCGGCGACG GCGCTGGCGG TGGGCCGGAT CGAGTTCGTG GACCGGGCGC TCCAGTCGTA CCGGCAGCAC GGCGCGAACG TGACCGGCTG GCAGGTGCCG AGGCTGGCCG ACGGGCTGCC CGGACTGCGC GGGCTGGCCG CGGCGGGCGC GGGCGTCGGG CACGGCGTCG ACCTGCTGGA GGCCAGGCAG GCGGAGCTGG ACCACATCAC GGAGCACGAG CTGCGGCGGA TCGCGCAGTT CTCGACCGTG CTGCTGATGC GCAACCAGGA CCTGCTGAGC GAGCGGGAGA CCGCGAAGCT GGAGCGGCTG GCGGGCGCGG AGCGGCGGCT GTGGCCGCTG GTGCGGCTGG CGCTGGAGGG CGAGGAGCGG CCGGAGACGG CGGGCGCCGA GCGGCGGCTG CTGGCGGCGG CCCTGCTGCG CAGGCACCAG CAGTAG
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Protein sequence | MVEQPVYADG AEDEVLSRLR RAADVSAGSA ELARALPSWE LIYHFSPQRT ALLAPIELVE GTRVLDFGCG SGVLTRAMGE LGAGVVGVEG TPTRAEAARE RCRDLPNVRI VDGGAEEIGL NGPFDLALLC GVLEYSSVYG DGPEALLEDV VGALEPGGAL VLAIENKIGL GYLTGRPEDH HGKSWVGLAD YPRGGARTWP RAELAELLAN AGLTAQRWML PYPDYKLPRV IVDADVHGRG DAVDLVDKLV RDPLYGAFGG TTGAVPGRSL HRTAVVEGFG ASVSPSFLVV AARTPEAVRR FVRPGLGWLV NSARLPRWRR SRVLTTALEL RAVEGAGAES DWLRQEAPAV EPLLPGRPLD SLLLEALARG DEEELRGLLG LWRSCCEEGA TGLGDQPRHP FLPGAPGVPV LAANALDVHP GNVVLLPDGS PRRIDLEWCA GEGVDAELVL VRALLEFARE VHRSGAPHPW EAELTTAELT LRLCGLVGLA GRARERWSEL LAAEARLQEL VSGTPSDEVL TALLGDVDRP GPARAWELPP LTQLAAAAAD REHLRGVADE LRGDVARAED ALDATRRLRE EAMAALAEVE RLREEATAEA AHLRRAVAKA DEQLGDALML VADAESERVG VERELAERSS RAEELAGENA RLRTELDRLA SSSVVRAGNR YLWPAARLVR GARDLALGRG GEEPDRVLRG VGKVAPSAVP LLAGRVRRVS ERDAGLRYQL SAPSEVPVGL GQVVDLDGWA VHDDLPVRAV SVELGGRVLP ATSGHPRPDV AAALGVHGWT GFRVRLPVRA GAVRPVLLVE LADATVLRRE LPELVGVPHE PEPVAVDWPG EGPRIAVCLA TYNAPGGHFH EQVQSIKEQT HSNWVCLISD DGSTDKAALR SATAGDPRFV VVEHAENVGF YRNFGRALAM VPVDADLVAL SDQDDVWDAD KLAVMAERFA DPSVQLAYCD MRLVDGGGAV VAESAWTNRP NQWTDLEQLL LLNTVTGAAT VLRADLLRER VLPLPPGTPA AYHDQWIAAT ALAVGRIEFV DRALQSYRQH GANVTGWQVP RLADGLPGLR GLAAAGAGVG HGVDLLEARQ AELDHITEHE LRRIAQFSTV LLMRNQDLLS ERETAKLERL AGAERRLWPL VRLALEGEER PETAGAERRL LAAALLRRHQ Q
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