Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0054 |
Symbol | |
ID | 8324199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 59060 |
End bp | 60733 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644940592 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003097874 |
Protein GI | 256374214 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCGC GGATCACGTT CGTCCTGGTC ACCTACGGCG GCGGCGAGCT GGCCGCGCAC TGCCTCGACG TGCTCGCCGA GCACACGCCC GAGCCGTACG AGGTCGTGGT CGTGGACAGC GCCTCCCCGG ACGGCAGCGG CGAGTGGCTG GAGCGCAACC TCACCGGCGC GACCGTCGTG CGGATGACCG AGAACCTCGG CTTCGGCGCG GGCTGCAACC TGGGCGTGCA GCACGCGCGC ACCGAGTTCG TCTGCTTCCT CAACGCCGAC GTCGAGGTCA CCGAGGGCTG GCTGGCCCCG CTGCTGGAGC TGCTCGACGG CACCCCGGCC GCCGCCGCGG CGGCCCCGCT GATGGTCTTC CCGGACGGCA GGCTCCAGGA GGCGGGCAGC CTCCTCGGCG GCGACGCGTT CAGCCGGGGC TGGGGCGACG GCTGGGAGGA CGGGGCCGAG CTGTACCCGA GGGTGGTCGA CTACGCGTCG GCCGCGTGCC TGGTGGTGCG GCGCAGGGCG TTCCACGACG TCGGCGGGTT CTCCTCGGAG TACCACATCG CCTACTACGA GGACACCGAC CTGCAGTTCG GGCTGCGCGA CCGGGGCTGG CAGGTGTGGG TGCAGCCGTC CTCGCACGTC GTGCACGTGC GGCACGGCAC CAGCTCCACG GCCACCGCCG AGCGGCTGTC GGACATCAAC CGCGAGGTGT TCCGCCGCCG CTGGGCCGAC GACCTGGCGC TGCGCCCGCC CGCGCTGGGC GTGCACGAGC ACCCGCACCG GCTGTGGTGG CTGCGCGACA AGCCCGCCTC GGTGCGGGTC CTGGTGGTCG CGCCCGGCGC GCCCGCCGAC GGGGACCGGG ACGCGGCGCT GCTCTCCGCG TGGCGGGCCG ACCCCGAGGC GGCGGTGACG CTGCTGGTGC CCGAGGACGC CGCCGACGAC GGCGCGTTCG CCCGCTGGCG CTCGCGCGGC GTCGAGGTGC GCCCCGGCGA CGCGGGCGAG GCCAGCCGCG AGCGGGTCGG CAACTACGAC GTCGTGGTGG CGCTCGGGGA CGTGCCCGTG GAGGCGGTGA CCCGCTGGCA GCGGGCCGCG GTCAAGGCGC TCGACCTCGC CTCGCTGCCG CACCGGGCGC ACGAGCGCCG GTTCGCGCTG AGCCGCGCCA AGGAGGACGC GGTCCGGGCG GGCGCCGCGC GGGCCAGGAC GGCCGAGCTG CTCCAGTGGG CCGACGTGGT GTCCTGCGCG TCCGAGGAGG ACGCCGAGTG GGTGCGGGGC GGCGCGGGCG CGACCGCGCA CGTGCTGACC CACCCCGTGG AGGCGCCCCC GGTGCTCTGC GAGCTGGCCG ACCGGGTCAC CGGTGACGCG GCCGGTGACG TGGACCTGGC CGTGCGCCGG GTGCTCGTCG CCCCGTTCCC CGGATCGGCG GGCCTGCGCC CGGAGCTGGT CAGGGCCATG GCGGTCGGCA CGCCGTTCGT CACCACCTGG GAGGGCGCGG ACGGCCTCGG CCTGCCCGGC TGGGTGTTCG AGTGCACCGA GGAGCAGCTG CTGACCGACG ACGAGCTGTG GGGGCGGGTG CACCGCGAGC TGGTCGCCGC CCACCGGGCC CGGTTCGCGC CCGAGCGGTT CCGCGCGGTC TTCGCCGACC TCCAGGCCGA CTGCGGGGTC GCCCCCGCGC CGCTCGTGCC GTAG
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Protein sequence | MTPRITFVLV TYGGGELAAH CLDVLAEHTP EPYEVVVVDS ASPDGSGEWL ERNLTGATVV RMTENLGFGA GCNLGVQHAR TEFVCFLNAD VEVTEGWLAP LLELLDGTPA AAAAAPLMVF PDGRLQEAGS LLGGDAFSRG WGDGWEDGAE LYPRVVDYAS AACLVVRRRA FHDVGGFSSE YHIAYYEDTD LQFGLRDRGW QVWVQPSSHV VHVRHGTSST ATAERLSDIN REVFRRRWAD DLALRPPALG VHEHPHRLWW LRDKPASVRV LVVAPGAPAD GDRDAALLSA WRADPEAAVT LLVPEDAADD GAFARWRSRG VEVRPGDAGE ASRERVGNYD VVVALGDVPV EAVTRWQRAA VKALDLASLP HRAHERRFAL SRAKEDAVRA GAARARTAEL LQWADVVSCA SEEDAEWVRG GAGATAHVLT HPVEAPPVLC ELADRVTGDA AGDVDLAVRR VLVAPFPGSA GLRPELVRAM AVGTPFVTTW EGADGLGLPG WVFECTEEQL LTDDELWGRV HRELVAAHRA RFAPERFRAV FADLQADCGV APAPLVP
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