Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0053 |
Symbol | |
ID | 8324198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 57672 |
End bp | 59063 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644940591 |
Product | hypothetical protein |
Protein accession | YP_003097873 |
Protein GI | 256374213 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.560507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGCCG ACCCCCAGCC CGCAGGCGGA ACCGCAGCCC TGTGGAGCAG CAGCGACCTG CCCGGACTGG GCGACCAACT CCTCGTGCGC GTGATCGAGC GCGAGCTCCG CGCCCGCCTC GGCGACTGGT GCGTGCGCCC GTTCGCCCCG CACGGGTGGA CCCGGCCCCA GCGCGCCGAC GCGGGCTTCA TCGCCGAGCC GCTCGGCGAG CGCACGCCCC ACCGGGTGCG GGAACTGGCC GAGAACCACC ACCTGCACCT GGTCGCCCCC TCGTTCCCGC TCGGGGACGA CCTCGCCGCG CGCTACGGCG CCGACGTGCC GGGCGCGGCG TTCTTCACCG CGGGCCTCGG GCTGCGCCCG GACGCGGCGT GCGTCGCGGT CCGCGTCGCC GAGGCCGTGC CCGCCGAGCT GGTCGCCTGG GCCGGTCGGC AGCCCCTGCT GTCGGTGCGC GACGAGGAGT CCGCGCGGCG GCTGCGCGAG GCGGGCGTCA AGGGCGAGGT GGCCGTGGTC GGGCACCCCG GCCTGCTGCT GGAGCGGCTG CTCCCCGCCG ACTCGCTCAA GGCCCGCGCG AACCAGCTGC GCCAGCTCGG CCAGCTGCCC GCCGACGGGC GCAGCTACCT GGTCGTGCAG GTGCCCGCCG AGGGCTTCGA GAAGCTCCGC CCCACCATCG CCAAGATCGT CGAGCTGCTG GCCGTGCAGG ACGTGGTGCT GCTGCCGATC GGGGTGCCCG TTCCCGAGGG CGACTGGGCC GCGCTGCCAC CGGACACGGT GCTGGAGGAC CGGGCCGCCG TGCTCGCCGA CTCGGCCGCC GTGATCGCGG TGGACGAGCA CGTGGCCGCC GCCGCCCAGG CCTACGGGCG CAACTGGGTG CTGCTGGACC CGACCGGTCG CGAGGGCGCC GCCGCCGAGC TGTTCGGCGC GGCCGAGCGG GTCGCGCAGC GGCCCAGCCA GCTCGCCGCC GCGTTCCGCC GGGCGCTGAA GGCGGGCCCT GGTGGGCACG AGGAGGCCGT GCGGGCGCTG GACGAGCACC TGGACGCGGT GGCCAAGACC GCCGAGGCGG CGTTCGCGGC CAGCGGCCAG GGCCTGCCCG ACCGGGTCGC CGCGCTGGTC GCCGAGAACC GCGCGCTGCG GGTGGCCCAC CACCGGCTGC GCGAGCGCGT CACCGCCGAC CGGCACGCCA TGGTCGAGCT GACCCTCAAG GGCGGCCCGG TGGAGGGCGG CCCCGAGCTG GAGGAGGAGC GGCGGTTGCA CGGCGAGCTG GCCGAGCGGC ACCGGGAGCT GGTGGAGCGG CTGGGCGCCT CCGAGCGGGA GCTGGACGCC ATGCGGCGCA CCAAGCTCTT CCGCTACACG CGCGCCCTGC GGTTCGTGTA CGGGAAGCTG CGCAGCCGAT GA
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Protein sequence | MLADPQPAGG TAALWSSSDL PGLGDQLLVR VIERELRARL GDWCVRPFAP HGWTRPQRAD AGFIAEPLGE RTPHRVRELA ENHHLHLVAP SFPLGDDLAA RYGADVPGAA FFTAGLGLRP DAACVAVRVA EAVPAELVAW AGRQPLLSVR DEESARRLRE AGVKGEVAVV GHPGLLLERL LPADSLKARA NQLRQLGQLP ADGRSYLVVQ VPAEGFEKLR PTIAKIVELL AVQDVVLLPI GVPVPEGDWA ALPPDTVLED RAAVLADSAA VIAVDEHVAA AAQAYGRNWV LLDPTGREGA AAELFGAAER VAQRPSQLAA AFRRALKAGP GGHEEAVRAL DEHLDAVAKT AEAAFAASGQ GLPDRVAALV AENRALRVAH HRLRERVTAD RHAMVELTLK GGPVEGGPEL EEERRLHGEL AERHRELVER LGASERELDA MRRTKLFRYT RALRFVYGKL RSR
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