Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0047 |
Symbol | |
ID | 8324192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 51262 |
End bp | 52014 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644940585 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003097867 |
Protein GI | 256374207 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATCT CGGGCACCGC GGCGATCGTC ACCGGCGGAG CGTCGGGGCT GGGCGCCGCC ACCGCGCGCG CGCTCGCCGC GCGGGGGGCG CGCGTGTTCG CGCTGGACAT CTCGGTGGAC GGCGCCCCCG CCGTGGAGGG CGTCACCTAC CTGGCGGCGG ACGTCACCTC GGAGGAGGAC GTCCAAGCGG CCGTCGACAC CGCCGCGGGC TCCGGCGCTC CGCTGCGGAT CGCGGTGAAC TGCGCGGGCA TCGGCCCGTC GACCAGGACG GTCGGCAAGG CCGGTCCGCA CCCGCTCGAC CTGTACCGCA AGGTCCTGGA CGTGAACGTG GTCGGCACGT TCAACGTCCT GCGCCTGGCC GCCGCCGCGA TGGGCGCGAC CGAGCCGGGG CCGGACGGCG CGCGCGGCGT CGTGGTCAAC ACCGCCTCCG TCGCCGCCTA CGAGGGCCAG ATCGGCCAGG TCGCCTACGC GTCCTCGAAG GCCGCGGTGG TCGGCATGAC GCTGCCCGCC GCGCGCGACC TGTCCTCGGT CGGCGTCCGG GTCATGACCA TCGCGCCCGG CATCGTCGAC ACCCCGATGC TGGCGACCGT GTCCGAGGAG TTCCGCGCGG GCCTGGCCGC CGGGGTGCCG TTCCCCAAGC GGCTGGCCCT GCCGGACGAG TACGCGAGGC TGGCGCTGTC GATCATCGAG CACGACTACC TGAACGGCGA GGTCGTCCGG ATGGACGGCG CGCTGCGCAT GGCGCCCAGG TAG
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Protein sequence | MEISGTAAIV TGGASGLGAA TARALAARGA RVFALDISVD GAPAVEGVTY LAADVTSEED VQAAVDTAAG SGAPLRIAVN CAGIGPSTRT VGKAGPHPLD LYRKVLDVNV VGTFNVLRLA AAAMGATEPG PDGARGVVVN TASVAAYEGQ IGQVAYASSK AAVVGMTLPA ARDLSSVGVR VMTIAPGIVD TPMLATVSEE FRAGLAAGVP FPKRLALPDE YARLALSIIE HDYLNGEVVR MDGALRMAPR
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