Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0001 |
Symbol | dnaA |
ID | 8331322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 98 |
End bp | 1831 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644940536 |
Product | chromosomal replication initiation protein |
Protein accession | YP_003097821 |
Protein GI | 256374161 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0108959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCCGACC ACCAGGCCGA CTTGGGTCTC GTGTGGGAGC AGGTGGTGGA GGAGCTGGCG AACAGCGCCC TCTCGTCCAG CACCTTGTCC CCGCAGCAGC GCGCGTGGAT GCGGGTGACC CGACCGATCG GCCTGCTCGA CGGGACGGCC CTGCTCGCGG CGCCCAGCGA CTTCGCCAAG GAGGCGATCG AGCGGGCCCT GCGCGAGCCC ATCACGGCCG CGCTGTCCCG CAGGCTCGGC CGCGCGGTCT CGCTCGCGGT GAAGGTGGAC TCGCCGGAGC CGCCGATGGC GAGCGGCCCG CCGACGACCC CGATCCCCGT GCCCATGCCG CCGGTCCCGC CGAGCGTCGC GCACGGCATC ACCTTCGGCC AGCAGGTGCT CGGCCCGGTC GGCCCGAACG GCCAGACCTC GCTGCCCATA GGCGGTCAGG CCGACGGCCC CGCAGGTCCG CCGCCCCCGG CCCCGACCGG TCTCCCGCTG GAGCAGCCCG CGAACGCGCA GGCGCCCGCG GAGAGCCCGG AGTCGGACGC CGAGCCGGAG GAGGGCGACG AGGAGCGCGA GACGCTCGCG ACCGTCAACG AGATCTGGCC GAAGTTCTCC AGGGGCGCGG GCGGTCAGCC GACCCCGCCG AGCGGGACGC CGTTCACCCG GCCCGCGAAC CCGGCGTCCT CGCAGACCCG GTTGAACGAG AAGTACAACT TCGACACCTT CGTCATCGGC GCCTCGAACC GGTTCGCCCA CGCGGCGGCG GTCGCGGTGG CCGAGGCTCC CGCCAGGGCG TACAACCCCT TGTTCATCTG GGGCGAGTCC GGTCTGGGGA AGACGCACCT GCTCCACGCG GTCGGGCACT ACGCGCAGCG TTTGTTCCCC GGGATGCGGG TCCGCTACGT GTCGACCGAG GAATTCACGA ACGACTTCAT CAACTCGCTG CGCGACGACC GGAAGGTCGC CTTCCAGCGC CGCTACCGGG ACATCGACGT CCTCCTCGTG GACGACATCC AGTTCCTGGA GGGCAAGGAG GGGACGCAGG AGGAGTTCTT CCACACCTTC AACACCCTCC ACAACTCGAA CAAGCAGATC GTGGTGTCCT CGGACCGGCC GCCGAAACGG CTGGAGACCC TGGAGGACCG GCTGCGGACG CGGTTCGAGT GGGGCCTCAT CACGGACATC CAGCCGCCCG AGCTGGAGAC GCGGATCGCG ATCCTGCGGA AGAAGGCCGC GCAGGACCGG TTGGCGGCGC CCGCCGAGGT GCTGGAGTTC ATCGCGGCCA GGGTGGTGCG GAACATCCGC GAGCTGGAGG GCGCGCTGAT CCGGGTCACG GCGTTCGCGT CGCTGAACCG GCAGCCGGTC GACGTCCAGC TCGCCGAGAT AGTGCTGCGC GACCTGATCC CGGACTCGCA CGTCCCGGAG ATCACCGCGC CCACCATCAT GGCGGTGACC GCCGAGTTCT TCGAGGTCAC CATCGAGGAC CTGTGCGGCC CTGGCAAGAC CAAGGTGCTG TCCACGGCCA GGCAGATCTC CATGTACCTG TGCCGCGAGC TGACGGACCT GTCGCTGCCG AAGATCGGGC AGACGTTCGG CGGCCGGGAC CACACCACGG TCATGTACGC GGACAAGAAG ATCCGCAAGG AGATGGCCGA GCGCAGGCGC ATCTACGACC AGGTCCAGGA GCTCACCTCG CGCATCAAGC AGCGCTCGCG CTACCTGGTG GCCCCCCCGG TCGATCCGAC CTGA
|
Protein sequence | MSDHQADLGL VWEQVVEELA NSALSSSTLS PQQRAWMRVT RPIGLLDGTA LLAAPSDFAK EAIERALREP ITAALSRRLG RAVSLAVKVD SPEPPMASGP PTTPIPVPMP PVPPSVAHGI TFGQQVLGPV GPNGQTSLPI GGQADGPAGP PPPAPTGLPL EQPANAQAPA ESPESDAEPE EGDEERETLA TVNEIWPKFS RGAGGQPTPP SGTPFTRPAN PASSQTRLNE KYNFDTFVIG ASNRFAHAAA VAVAEAPARA YNPLFIWGES GLGKTHLLHA VGHYAQRLFP GMRVRYVSTE EFTNDFINSL RDDRKVAFQR RYRDIDVLLV DDIQFLEGKE GTQEEFFHTF NTLHNSNKQI VVSSDRPPKR LETLEDRLRT RFEWGLITDI QPPELETRIA ILRKKAAQDR LAAPAEVLEF IAARVVRNIR ELEGALIRVT AFASLNRQPV DVQLAEIVLR DLIPDSHVPE ITAPTIMAVT AEFFEVTIED LCGPGKTKVL STARQISMYL CRELTDLSLP KIGQTFGGRD HTTVMYADKK IRKEMAERRR IYDQVQELTS RIKQRSRYLV APPVDPT
|
| |