| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2066 |
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| Symbol | |
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| ID | 4671342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2178160 |
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| End bp | 2179374 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639839144 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_986318 |
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| Protein GI | 121594422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.595829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCC TGCTCTCCCT ACTGCAGCCC TATCCGTTCG AGCGGCTGCG ACAGCTTTTT
GCGGGGGTGA CGCCCTCGGC CGCACACCGC GCCATCAGCC TGGGCATCGG CGAGCCACGC
CATGCAACGC CGCCGTTCAT CCAGGAGGCC CTGGCCGCCA ACCTGGCAGG CCTGGCCAGC
TACCCCTCCA CCGCCGGTGA CCCCAGCCTG CGCGAAGCCT GTGCCGGCTG GATGCAGCGG
CGCTACCATA TTCCCGTCAA CCCCGCCACG CAGGTGCTGC CGGTGAACGG TTCGCGCGAG
GCGTTGTTCG CATTCGCGCA AACCGTGGTG GACCCCACCC GCGCAGGCGC CACCGTGGTG
TGCCCCAACC CGTTCTACCA AATCTATGAA GGCGCCACGC TGCTGGCCGG CGCCACGCCG
TACTACGCCC CGAGCGATCC AGCCCGCAAC TTTGCCGTGG ACTGGGACAG CGTGCCCGAG
GAGGTATGGC AGCGCACGCA ACTGCTCTTC GTGTGCTCGC CCGGCAACCC CACGGGCGCC
GTGATGCCCC TGCCCGAGTG GGAGAAGCTC TTCGCGCTGA GCGACCGTTA CGGTTTCGTG
ATCGCCTCGG ACGAGTGCTA CAGCGAAATC TACTTCCGCG ACGAGCCACC ATTGGGCGGC
ATGGAGGCTG CAGCCAAGCT CGGACGCAGC GACTACCGCA ACCTGATCGC CTTCACCAGC
CTGTCCAAGC GCAGCAACGT GCCGGGCCTG CGCAGCGGCT TCGTGGCGGG CGACGCGGCA
CTCATCAAGG CGTTTTTGCT GTACCGCACC TACCACGGCA GTGCCATGGG GCCCGCCGTG
CAGGCCGCCA GCGTGGCTGC CTGGAACGAT GAGGTGCACG TGGAAGAAAA CCGTGCCCTT
TACCGCCAGA AGTTCGCCCA GGTCACGCCC ATGCTCGCCG AGGTGATGGA CGTGCGCCTG
CCCGACGCGG GTTTCTACCT CTGGGCCAAG GTGCCCGACG CCCTGGGCAT GAGCGATGCG
GAGTTCGCCC AGGCCCTGCT GGCTCAATAC AATGTCACGG TATTGCCGGG CAGCTATCTC
GCCCGCGATT CCGGTGGCGC CAACCCCGGC GCCCAGCGCT TGCGCATGGC CCTTGTGGCC
GAGACCGCGG AATGCGCCGA AGCGGCCTCG CGCATCGTGC AATTCATCCA ATCCCGTACG
TTATTCCATC CATGA
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| Protein sequence | MNPLLSLLQP YPFERLRQLF AGVTPSAAHR AISLGIGEPR HATPPFIQEA LAANLAGLAS
YPSTAGDPSL REACAGWMQR RYHIPVNPAT QVLPVNGSRE ALFAFAQTVV DPTRAGATVV
CPNPFYQIYE GATLLAGATP YYAPSDPARN FAVDWDSVPE EVWQRTQLLF VCSPGNPTGA
VMPLPEWEKL FALSDRYGFV IASDECYSEI YFRDEPPLGG MEAAAKLGRS DYRNLIAFTS
LSKRSNVPGL RSGFVAGDAA LIKAFLLYRT YHGSAMGPAV QAASVAAWND EVHVEENRAL
YRQKFAQVTP MLAEVMDVRL PDAGFYLWAK VPDALGMSDA EFAQALLAQY NVTVLPGSYL
ARDSGGANPG AQRLRMALVA ETAECAEAAS RIVQFIQSRT LFHP
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