Gene Ajs_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0616 
Symbol 
ID4674440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp647916 
End bp648752 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content65% 
IMG OID639837742 
ProductHAD family hydrolase 
Protein accessionYP_984939 
Protein GI121593043 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCTC TTGCCTCATG GGACGAGTTG GCGCGCACGT GCATCACCGG CGTGCTCACC 
GACATCGACG ACACCCTGAC CACCGATGGC GCCATCACCG CCGATGCCCT GCAGGCGCTG
GCCGACCTGA AAGCCGCAGG GCTGCACGTC ATTCCGATCA CGGGCCGGCC GGTGGGCTGG
AGCGAGCCTT TTGCCGCTGC CTGGCCGGTG GACAGCATCG TTGCTGAGAA CGGTGCGGTG
GCGCTGCTGC GGGCGTCCCG AAATTTTGCC CCAAATGGCC TACAGTCCCC GTGCGATAAG
CGCGAGCAGC TATTAAAGTT GTATCAACAG GACGCCGCCA CGCGCGCCTC CAACTTCGCG
CGCATGCAAC AGGTGCTGGC CGAGATTGAA GCCGCCGTGC CCGGCGCCCG GCGCGCCACC
GACTCGCCCG GGCGCGAGAC GGACATCGCC ATCGACCACA GTGAATTCAC GCACCTGCCC
CAGGCGGCCA TCGACCAGGC GGTGGCCCTG ATGCATGCCG CGGGCATGAA CGCCACCGTG
AGCAGCATCC ACATCAACGG CTGGTTCGGC GCGCACAACA AGCTGGAGGG TGCGCGCTGG
ATCGTGCGCG AGCTGTTCGG GCGTGATCTG GACGCCGAGC TGGAGCGCTG GGTCTACATC
GGTGACTCCA CCAATGACCA ACTCATGTTT GCGCACTTCC CGCACAGCGT GGGTGTGGCC
AATATTGCGC GTTTCGTGCC CCAACTGCAG CATCTGCCGC GCTATGTGAC GCAGGGCGAG
CGCGGGGCAG GGTTTGCAGA ACTTGCGCAA TCCTTGCTCG CCATCAACGA TCGCTGA
 
Protein sequence
MHPLASWDEL ARTCITGVLT DIDDTLTTDG AITADALQAL ADLKAAGLHV IPITGRPVGW 
SEPFAAAWPV DSIVAENGAV ALLRASRNFA PNGLQSPCDK REQLLKLYQQ DAATRASNFA
RMQQVLAEIE AAVPGARRAT DSPGRETDIA IDHSEFTHLP QAAIDQAVAL MHAAGMNATV
SSIHINGWFG AHNKLEGARW IVRELFGRDL DAELERWVYI GDSTNDQLMF AHFPHSVGVA
NIARFVPQLQ HLPRYVTQGE RGAGFAELAQ SLLAINDR