| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0396 |
|---|
| Symbol | |
|---|
| ID | 8490362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 405540 |
|---|
| End bp | 406871 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646358418 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_003238399 |
|---|
| Protein GI | 260892302 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG AACGGTTTCA GTGCCTGATT TGTGGCTACC AGAGCACGCG CTGGCTGGGG
CGCTGCCCGG AGTGCGGGAG CTGGGACTCT TTCTCTGCCG GTACTGCCAA AGATTCCGGT
AAAGAGCTGG CCGCCGTCTA CCCCCTGCAG GAGATAGAGG GTGAGGAAGA GCGCCTGCAG
GTGGGGATGG AAGAGTTTGA CCGGGTGCTG GGCGGAGGGA TAGTCCCGGG TTCCCTTATT
CTGGTGGGGG GAGACCCGGG CATAGGCAAA TCCACCTTGC TCTTGCAGGT GGCCTCTCAA
CTCGGTAGGT ATGGACAAGT TCTCTACGTG TCCGGGGAGG AATCGGTGCG CCAGGTGGCA
TCAAGGGCGC GGCGCTTGCG ACTGGAAGCT TCCTCCCTGT TGCTGGCAGC GGCCACCGAC
GTGGAAGTGA TCAAGGAGCA GGTAGAACGC CTAAGACCCT GCGCGCTGGT GGTAGACTCC
ATCCAAACCC TGGTGCATCC CCGGGTGCAG GCGATCCCGG GAAGTGTGGC TCAGGTGCGG
GAATGCATCG GGGTGTTGCA ACAGCTGGCT AAAGGCTTAA ACCTCCCCAT CATGGTGATA
GGGCACGTAA CCAAGGAGGG TATTCTGGCG GGGCCGCGTC TGCTCGAGCA CATCGTGGAC
GTGGTGCTTT ACCTGGAGGG GGACCGCTAC CAATCCTACC GCCTCCTGCG GGGGGTGAAA
AACCGCTACG GTGCCACACA CGAGATAGGG GTCTTCACTA TGACCGAGAG GGGCATGGTG
CCGGTGGTCA ACCCTTCGGC CCTTTTCTTG GCCGGGAGCC AAGCCGATAA TTCAGTAGGG
GCGGCGGTGG TACCCACCCT AGAGGGGACA CGCCCTTTGT TGGTGGAGAT CCAGGCCTTG
GTAAGCACTA GCTACTACTC TTTGCCCCGG CGTATGACCA CCGGGCTCGA TTTTAACCGG
ACCCTTTTGC TCCTGGCCGT TTTGGAGAAG CGCCTGGGAC TGCGTCTGAG CTCCTGCGAT
GTATACCTGA ACGTGGTAGG GGGGATGAAG CTGATAGATC CGGGGGCCGA TCTAGCGGCG
GCGCTGGCCG TCGTCTCCAG CTACCGGGAG CTCCCCTTCC CCCGGGACGT GGTGGTGGTA
GGTGAGGTAG GGTTGACGGG AGAGGTGCGC CCCGTGCGCC TTCTGGAACT GAGGCTTAAA
GAGGCGGCCA AGCTGGGTTT TTCCCGGGCG GTAGTAGGAA GGTCTAGCTG TTGCCGGTCT
TTGCCGGAAA AATTTACCTT GATTCCGGTA GCTTCCTTGG GAGAGGCCAT AGAGGTTCTC
TGGCAGAGGT AA
|
|---|
| Protein sequence | MAKERFQCLI CGYQSTRWLG RCPECGSWDS FSAGTAKDSG KELAAVYPLQ EIEGEEERLQ
VGMEEFDRVL GGGIVPGSLI LVGGDPGIGK STLLLQVASQ LGRYGQVLYV SGEESVRQVA
SRARRLRLEA SSLLLAAATD VEVIKEQVER LRPCALVVDS IQTLVHPRVQ AIPGSVAQVR
ECIGVLQQLA KGLNLPIMVI GHVTKEGILA GPRLLEHIVD VVLYLEGDRY QSYRLLRGVK
NRYGATHEIG VFTMTERGMV PVVNPSALFL AGSQADNSVG AAVVPTLEGT RPLLVEIQAL
VSTSYYSLPR RMTTGLDFNR TLLLLAVLEK RLGLRLSSCD VYLNVVGGMK LIDPGADLAA
ALAVVSSYRE LPFPRDVVVV GEVGLTGEVR PVRLLELRLK EAAKLGFSRA VVGRSSCCRS
LPEKFTLIPV ASLGEAIEVL WQR
|
|---|
| |