| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0012 |
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| Symbol | |
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| ID | 8489972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 14446 |
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| End bp | 15597 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646358052 |
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| Product | integrase family protein |
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| Protein accession | YP_003238039 |
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| Protein GI | 260891942 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000168789 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTGGGA GCATCCGCAA GCGGGTGGGC AAGAGGGGAG TCTACTACGA CGTGGTGTTC
GACATCGGCA GAGACCCGGT GACGGGGAAG CGCAAACAGA AGTGGCTGCG GGGCTTCAGG
ACGAAGAAAG AAGCGGAAGC AGCCTTAGCC CAGGCCATAG CCGAGGTGGA GAGGGGCACT
TACATCGACC CGGAGAAGGT CACCCTGGCG GAGTACCTGA AGGAGTGGCA CGCTGCCCGC
AAGCACAAGC TTTCCCTGCG CACCTGGGAG CGGTACGGGC AGCTCATCGA GCACTGGCTC
ATCCCACACC TTGGGGGCAT CCCCCTGCGC AAACTCTCGC CGGTCCACCT GGAGAAGTTC
ATAAGTGCCA TGCTGGAAGC GGACCGGCTT GACGGTAAGG GGAAGATCTC TCCCACCACC
GTGAGGCACG CCGCTCTGGT TCTGAACAAG GCCCTGCGCG ACGCGGTGAA GAAGCGCCTC
ATACCTTACA ACCCCATGGA GGCGGTGGAC AAGCCGCGTA AGGCGAGGAA GGAGCCACCG
GCCCTGAAGG AAGGGGAGCT GCGCAGGCTC ATGTCAGCCG CCGAGGGCAC CTACCTCTAC
GCGCCCATCA CCTTGGCCGT CTACACCGGC GCGAGGCTGG GGGAGATCCT GGGGCTCAGG
TGGCGGGACG TGGACTTCGA GGCCGGTTGC ATCTTCATCC TCCAGGCGCT CAAGAGGAAC
TTGAAAGGGG AGCTCTACTT CGACGAGCCC AAGACGCCGA GATCCAGGCG GAGGATAGAG
ATAGGCCCCG CCTGCCTGGC GGCGCTCAGG AAGCAGAAAA AGCTACAGGC CGAGTGGAAG
CTCAAGGCGG GTTCGGCGTG GCAGGAGACA GGGCTGGTCT GCACAAGGGA GGACGGAAGC
CCCATCGACC CTCACGCGTT CTCCAGCGCC TTCCGCAAGC TGGCCTCAAA ACTCGGCATC
GACGCCAACT TCCACGCGCT CAGGCACACC CACGCCACCA TGCTCCTGAA GGCCGGAGTT
CACCTGAAGA TCGTCTCGGA AAGGCTGGGG CATGCGTCCG TAGCCATCAC CGGCGACCTG
TACTCCCACG TGCTGCCGGG GATGCAGGGA GGAGCAGCCC AGCTCGTGGA GGAGGAGCTT
AACGGACGTT AG
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| Protein sequence | MRGSIRKRVG KRGVYYDVVF DIGRDPVTGK RKQKWLRGFR TKKEAEAALA QAIAEVERGT
YIDPEKVTLA EYLKEWHAAR KHKLSLRTWE RYGQLIEHWL IPHLGGIPLR KLSPVHLEKF
ISAMLEADRL DGKGKISPTT VRHAALVLNK ALRDAVKKRL IPYNPMEAVD KPRKARKEPP
ALKEGELRRL MSAAEGTYLY APITLAVYTG ARLGEILGLR WRDVDFEAGC IFILQALKRN
LKGELYFDEP KTPRSRRRIE IGPACLAALR KQKKLQAEWK LKAGSAWQET GLVCTREDGS
PIDPHAFSSA FRKLASKLGI DANFHALRHT HATMLLKAGV HLKIVSERLG HASVAITGDL
YSHVLPGMQG GAAQLVEEEL NGR
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