Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1478 |
Symbol | |
ID | 5160475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 1641406 |
End bp | 1642149 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640553391 |
Product | RNA-binding S4 domain-containing protein |
Protein accession | YP_001234605 |
Protein GI | 148260478 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.367389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACC CGGAAAGCGG CGAACGCGGA GAGCGGATTG CGAAATACCT GGCCCGGGCT GGCGTGGCGA GCCGACGGGA CGCCGAGCGC ATGATCGAGT CCGGACGGGT CGCTCTCAAC GGGACGAAGG TTCTGCACCC GGCGACCTTC GTCGCCGCTG GCGACATCAT CCTTATCGAC GGTAGTCCGG TCGGTGAGCC ATCGCGTACC CGGCTCTGGC GCTACCACAA GCGGGCTGGA CTGCTGACCA CGCATCGCGA CCCCGAGGGC CGGCCCACGA TCTTCGAGCG GATGCCGCCC GAATTGCCCC GTGTTGTCAG CGTTGGCCGG CTCGATCTCA ACAGCGAGGG GCTGCTGCTG CTCACCAATG ACGGCGCCCT CGCCCGGCAA CTGGAACTGC CGACAACCGG CTGGCTGCGC CGCTACCGTG TACGGGTGCA CGGTACGGTC GACCCCGCCC GCCTGGCGGC GCTGAAGGGC GGCATCGTGG TGGACGGTGT TCGATATGGT CCGATCTCGG CTGAAATCGA TTCCACGAAG GGATCGAATT CCTGGCTGGC AGTCGGGCTT AACGAGGGCA AGAACCGCGA GATCCGAAAG GTCATGGCCG CGCTCGGGCT TGAGACAACG CGACTCATTC GTATCGCCTA TGGCCCGTTC CAGCTCGGCA ACCTGCCGCG AGGGGCGGTC GCGGAAGTCA ATCCCAAGGT ACTCCGCGAA CAATTGCCGA AAGTTGGCCG ATGA
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Protein sequence | MTNPESGERG ERIAKYLARA GVASRRDAER MIESGRVALN GTKVLHPATF VAAGDIILID GSPVGEPSRT RLWRYHKRAG LLTTHRDPEG RPTIFERMPP ELPRVVSVGR LDLNSEGLLL LTNDGALARQ LELPTTGWLR RYRVRVHGTV DPARLAALKG GIVVDGVRYG PISAEIDSTK GSNSWLAVGL NEGKNREIRK VMAALGLETT RLIRIAYGPF QLGNLPRGAV AEVNPKVLRE QLPKVGR
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