Gene Acid345_3909 details

Gene Information

• Locus tag: Acid345_3909
• ID: 4072246
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: +
• Start bp: 4624580
• End bp: 4628041
• Gene Length: 3462 bp
• Protein Length: 1153 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637985935
• Product: TonB-dependent receptor
• Protein accession: YP_592983
• Protein GI: 94970935

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000652763
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: 3
• Fosmid unclonability p-value: 0.00581227
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAGTCTT TCCGCCACGT AGCGATAAGC GTTTTCCTCT TTGTTGTTCT CACAGGCATC 
GGCCTGGCGC AGAACACCAG CCAGATCACC GGTTCGGTCC GCGACTCAAG TGGCGCGGCC 
GTACCCAATG CCGAAGTGGT CGTGAGCAGT CCGGAGCGCG GTATCGAGCG CCCTACAAAG 
ACCAACGACG CCGGTGAATA TGCAGTCAGC GGCATTCCCG CCGGTTCCTA CAACTTGAAA 
GTTACGGCGC AGGGCTTCAA GTCCTACGAA GCGAAAGGCA TCGTGCTTCG CGTGGCGCAG 
AAGACACGCG CTGACGCCGA CCTTCAGATC GGCGGCACGA CGACCGAAGT CACCGTAGCC 
GGCGAGAGCA TCGGCCAGGT GGAAACGCAA TCGTCGGATA TGTCGGGCGT CGTCACCGGC 
AAAGAGATTT CGCAACTTCA GTTGAATGGA CGCAACTTCA CGCAGCTCGT GACCCTCGTC 
CCCGGCGTCA GCAATCAGAC CGGACAGGAT GAAGGCACCG TGGGCATCGC TGGGAACGTC 
TCTTTCAGCT TCAATGGCGG CCGCACTGAG TACAACAATT GGGAGCTCGA CGGTGGCGAC 
AATATGGACA ACGGGTCCAA CGCCACCCTT AACGTTAACC CAAGCTTGGA CTCCATCGCC 
GAAGTCAAAG TGCTCACCTC GAACTACGGC GCGCAGTATG GCCGCAGCGG TTCTGGCACG 
GTCGAAGTCG AGACCAAGTC TGGTACCAGC AGCTTCCACG GCGACGCATA CGAATTCGTT 
CGCAACGACG CGTTCAACGC GAAGAGCTAT TTCTCTTACA CCGAGCCGCT GATCCCGGCT 
TATAAGAAAA ACGACTACGG CTACACTCTC GGCGGACCGA TCTTCATTCC CGGGCACTAC 
AACGAGAGCA AGCAGAAGTC TTTCTTCTTC TGGTCGCAGG AGTGGCGCAA AGAACGCGTT 
CCGGCGCCGT TCAACATTCC GGTGCCGTCA GCCGCGGAGC GCGCCGGAGA CTTCAGTGAC 
CAGTGCCCCG GCAACTCCTG TCCGCATATG GCTGACGGGA GCCCGTATCC CGGCAACATC 
GTTCCGATTG ATCCGACGGG AAGTGCGCTT CTGGCGCTGA TACCGGGGGC GAATCTCGGC 
TCAGGAGCGA GTTCGGTGTA CAACGCTTCG CCGACACAGC CGACCTACTG GCGCGAAGAA 
CTCTTTCGCA TCGATCACAA TATCAACGAC AAGTGGCACG TGACGTTCCG CTACACCCAC 
GATAGCTGGA ACACAATCAA CCCAACGTCA CAATGGACCG GTAGCGCTTT CCCAACGGTG 
CAGACGAATT TCGTCGGCCC GGCAATCAGC ATGGTGGGGC GTGTCACAAC GACCTTCACG 
CCGACGCTGG TCAACGAGTT CGTGATGAGC TACACCACCG ACCACATCAC GTTCTCTTCG 
ACCGGAACCC CGAATCCGAA TGCCTGGCAG CGACCGCAGG ATCTCGCCAT GGGCTATCTC 
TTTAACAACG GTTTTGGTGG AAAGCTTCCG GCGATCACCG TCTCCGATCC TGCTTACGGC 
GGAGGCTTCT ACGAGGACCC GAACGGCGAA TGGCCGGAAG GCGCGTACAA CTCGAACCCG 
ACTTACACCT TCCGCGACAA CTTGAACAAG ATCATCGGAA GACATAACCT GCAGTTCGGT 
GCGTACTACG TTGCGGCACA GAAGAACGAA CTCAGCGGCA TCCTGGTCAA TGGATCGCTC 
GGCTTCGACA GCACGTCGGC GGTTTCAACC GGGAATGCCT TTGCAGACAT GCTGACCGGA 
AATATCGCGA GCTTCTCGCA GGGCAGCGAC AACATCAAGT TCTACAACCG CTACAAGATC 
CTCGAACCCT ACTTCCAGGA CGACTGGCGC GTCACGCCGA AACTCACGTT GAACCTCGGA 
ATCCGTCTCA GCGCGTTCGG GACTTACCGC GAGAAGGACA ATCACGCCTA TAACTGGGAC 
CCGAAAGCCT ACGATCCAAC CTCCGCTCCG GTGTTCAATG CTGATGGTTC AGTGAGCGGC 
GGCAACATTT ACGACGGGCT TGTGCAGTGC GGCAAGAGCA GCGTGCCGGA AGGCTGTATG 
TCCGGCCATC TGTGGAACTG GGCTCCGCGA GTGGGCTTCG CTTGGGATCC GTTCGGCACC 
GGCAAAACTG CTGTTCGCGG CGGCTACGGG ATCTTCTACG AGCACACCAA CGGCAACGAA 
GCCAATACCG AAGGCTTGGA AGGGCAGTCG TCTCCGCTGA TCCAGACCGC TTCGCAGTCG 
AGTGTGGTTG GGTACACCAA TCTTGGCGTC GCCGCCGGGC TTGACGCGCA GTTCCCGCTG 
AGCTTCATCT CCGTTCCCAC GAGCGCCACA TGGCCGTACA TGCAGCAATG GCACTTTGAT 
ATCCAGCACG AAATCATGAA GGACACCGTG CTGGTTGTGG CCTACGTCGG CAGCAAGGGC 
ACCCACCTCG GCCGGCAGTC GGACATCAAC CAACTTCTCC CGACGCCGCT CGCCGACAAT 
CCATTTAAGG CAGGCGAGGT CATCACCTCG GATGTCTGCA ACAACATGAT GACGCCTAGC 
GGCGTTGCCG TGACCGGGCA GGCAGCAACC AATCTCGCGG TCGCTTGCGG CGCTGATGCC 
AACCCATTTC GTCCGTACCT GGGCATCGGC ACCATCACCC GCTTGGAGAA CGAGTCGGGC 
TCCACGTATC ACGCCTTCCA ACTCGCAGCA CGTCGCAACG TTGGACAGTT ACAGTTGAAC 
GTCGCTTACA CCTGGAGCCA CTCCATTGAC GACGCTTCCG ACCGCTATGA CGGGTCGTTC 
GTCGATGCCT ATGATCCGCG CCTGAATCGC GCCAGTTCGA GCTTCGATAT TCGGCACATG 
CTTAACGTAG GCTACGTTTG GGACATGCCG TTCTTTAAGG ACCGTGGCTG GAAGAATATC 
CTGCTCGGTG GCTGGGAACT GTCTGGCATT ACCAGCTTCC AAACCGGCAC ACCGTTTAGC 
GTGCCGAACG GCGGCGCTTA CGGTGACAAC GCTGGGGTCG GCAATGGCGT CGGTACCGGT 
TCGTATGCGG ATGTCGTCTC GGATCCGTAC TCGAATATCC CCGGCGGAAA CGGCGCATTC 
CTTGGGCCGC TCGTCGGGAA CCCGGCGGCG TTCGCACAGC CGACAGCACT TACGTTCGGA 
AACTCGGGAC GCAATTACCT GCGTAACCCG GGCTACACCA ACTGGAACAT GTCGCTCTTC 
AAGAACTTCA AGCTCAGCGA GCGCTTCAAT CTCCAGTTCC GAAGCGAAGC CTTCAACATC 
TTCAACCACA CCGAGTGGGC TTCGGTTGGC GGCGACGCCG GCTCCGCTGC CGGCAACGGC 
CTGCAGTCCT ACACCAACTC CTTCGGAGGA GACAATTTCC TGTACATCGG AGCTGCCCAT 
CCGCCGCGCA TTCTGCAACT CGGTTTGAAA CTTGTCTTCT AG 

 

Protein sequence

MKSFRHVAIS VFLFVVLTGI GLAQNTSQIT GSVRDSSGAA VPNAEVVVSS PERGIERPTK 
TNDAGEYAVS GIPAGSYNLK VTAQGFKSYE AKGIVLRVAQ KTRADADLQI GGTTTEVTVA 
GESIGQVETQ SSDMSGVVTG KEISQLQLNG RNFTQLVTLV PGVSNQTGQD EGTVGIAGNV 
SFSFNGGRTE YNNWELDGGD NMDNGSNATL NVNPSLDSIA EVKVLTSNYG AQYGRSGSGT 
VEVETKSGTS SFHGDAYEFV RNDAFNAKSY FSYTEPLIPA YKKNDYGYTL GGPIFIPGHY 
NESKQKSFFF WSQEWRKERV PAPFNIPVPS AAERAGDFSD QCPGNSCPHM ADGSPYPGNI 
VPIDPTGSAL LALIPGANLG SGASSVYNAS PTQPTYWREE LFRIDHNIND KWHVTFRYTH 
DSWNTINPTS QWTGSAFPTV QTNFVGPAIS MVGRVTTTFT PTLVNEFVMS YTTDHITFSS 
TGTPNPNAWQ RPQDLAMGYL FNNGFGGKLP AITVSDPAYG GGFYEDPNGE WPEGAYNSNP 
TYTFRDNLNK IIGRHNLQFG AYYVAAQKNE LSGILVNGSL GFDSTSAVST GNAFADMLTG 
NIASFSQGSD NIKFYNRYKI LEPYFQDDWR VTPKLTLNLG IRLSAFGTYR EKDNHAYNWD 
PKAYDPTSAP VFNADGSVSG GNIYDGLVQC GKSSVPEGCM SGHLWNWAPR VGFAWDPFGT 
GKTAVRGGYG IFYEHTNGNE ANTEGLEGQS SPLIQTASQS SVVGYTNLGV AAGLDAQFPL 
SFISVPTSAT WPYMQQWHFD IQHEIMKDTV LVVAYVGSKG THLGRQSDIN QLLPTPLADN 
PFKAGEVITS DVCNNMMTPS GVAVTGQAAT NLAVACGADA NPFRPYLGIG TITRLENESG 
STYHAFQLAA RRNVGQLQLN VAYTWSHSID DASDRYDGSF VDAYDPRLNR ASSSFDIRHM 
LNVGYVWDMP FFKDRGWKNI LLGGWELSGI TSFQTGTPFS VPNGGAYGDN AGVGNGVGTG 
SYADVVSDPY SNIPGGNGAF LGPLVGNPAA FAQPTALTFG NSGRNYLRNP GYTNWNMSLF 
KNFKLSERFN LQFRSEAFNI FNHTEWASVG GDAGSAAGNG LQSYTNSFGG DNFLYIGAAH 
PPRILQLGLK LVF