| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3249 |
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| Symbol | |
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| ID | 4072584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 3848975 |
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| End bp | 3850312 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637985270 |
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| Product | glycoside hydrolase, clan GH-D |
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| Protein accession | YP_592324 |
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| Protein GI | 94970276 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.062257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAG CGATATTTGT CGCACTCATT TTCTCCGCTG TTTCGTGCGC GCAGACAGAG
CTTGCCCCGA CACCGCCTAT GGGGTGGAAC AGCTGGAACT CCTACGGGCA GACGATCTCG
GAGGCCGACG TGCGCGCCAC TGCCGATGTG ATGGCGCAGA AGCTGAAAGC CTTCGGATGG
CAGTACGTGG TGATTGATGA AGGCTGGTAT GTGCTGAAGC CGGGCGGCGA CGCGAAGCTG
TACCAGTTCC GGATGGATGA GAACGGGCGC TTTCTTCCGG CGGAGAGCCG CTTCCCTTCC
GCGAAGGACG ACGGCATGAA GGCGATTGCG GATTACGTAC ATTCGCTCGG GCTGAAGTTT
GGGATCCATG TGATTCGCGG GATCCCGCGC GAGGCGGTGG CGAAGAATTT GCCGATCGCG
GGGAGTTCGT TTCATGCGGC GGAGGCGGCG GATACGAGCG ATGTGTGTCC GTGGAATGCG
TACAACTACG GGCTGAAGGA CAACGCCGCG GGGCAGGCCT ATTACGACAG CATTGCGAAG
CTGTATGCGA GCTGGGGCGT GGACTTCATC AAGATTGATT GCATTTCGTC GCACCCATAC
AAGGGCGCGG AGATACGGAT GATCAGCGAG GCGCTGCATA AGAGCGGGCG TGCGATGGTG
CTGAGCCTGT CGCCGGGGCC GACGCCGCTG GAGAAGGCCG ATGAGGTCGC GAAGTACGCG
GAGATGTGGC GCATCTCGGA TGACTTCTGG GACCACTGGG GCGTGTGGAA GGGACATGAG
TGGTCTCAAG GATTGAAGGC GCAATTCGAG AATGCGGCGA AGTGGAGCGC GCATCAGACG
CCGGGACATC GGCCCGACAA TGACATGCTG CCGTTGGGAT ATCTGGGGCC GCATCCGGGT
GAAGGCGAGG TCAGGAATAC GCAGTTCACG GCGGATGAGC AGAAGACGCT GATGACGCTG
TGGGCGATTT CGCGGTCGCC GCTGATGATG GGCGGGAACT TGACGAAGAT GGATGAGGCG
ACGCTGGGAG TGCTGACGAA TAAGTCCGTC ATAGCGCTTG ACCAGCAGTC TCACAACGGC
AAGCAAGTGA TCAACGATGG GAATACTGTG GTTTGGTTCG CGGAGGGCTT GTCTCCGATC
GCTGGATACG TTGCTGTGTT TAACATTTCT GATCGCGAGC AGTCCGTGAA GTATTCGTGG
AAGGAACTTG GTTTAGCGGA GGGAGCACGC GTTGCGCGAG ATGTTTGGGC GGAACGTTCT
TTGGGGAAAC AGGAGGGCGT TAACCTGAAG CTTGCGCCCC ACGCGTGTGT GCTGTACCAG
CTGTCATTGT TGAAATAG
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| Protein sequence | MKRAIFVALI FSAVSCAQTE LAPTPPMGWN SWNSYGQTIS EADVRATADV MAQKLKAFGW
QYVVIDEGWY VLKPGGDAKL YQFRMDENGR FLPAESRFPS AKDDGMKAIA DYVHSLGLKF
GIHVIRGIPR EAVAKNLPIA GSSFHAAEAA DTSDVCPWNA YNYGLKDNAA GQAYYDSIAK
LYASWGVDFI KIDCISSHPY KGAEIRMISE ALHKSGRAMV LSLSPGPTPL EKADEVAKYA
EMWRISDDFW DHWGVWKGHE WSQGLKAQFE NAAKWSAHQT PGHRPDNDML PLGYLGPHPG
EGEVRNTQFT ADEQKTLMTL WAISRSPLMM GGNLTKMDEA TLGVLTNKSV IALDQQSHNG
KQVINDGNTV VWFAEGLSPI AGYVAVFNIS DREQSVKYSW KELGLAEGAR VARDVWAERS
LGKQEGVNLK LAPHACVLYQ LSLLK
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