Gene Acid345_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3223 
Symbol 
ID4072558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3815986 
End bp3817377 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content59% 
IMG OID637985244 
Productsoluble pyridine nucleotide transhydrogenase 
Protein accessionYP_592298 
Protein GI94970250 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.199008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACG GATACGACTA TGACCTGGTA GTCCTTGGAA GCGGGCCAGC CGGCCAAAAA 
GGCGCGATTT GCGCTGCCAA ACTGCACAAG CGAGTTGCGA TTGTTGAGAA CCGTTGGGCG
CTCGGCGGCG TTTGCGTACA CAGCGGAACG ATTCCGAGTA AGACCCTCCG CGAAGCGGTG
CTGTATCTCA GCGGCTTCCG CGAGAAGACG TTTTACGGTC GCAGCTACCA GGTAAAAGAC
CGCGTGGTGA TGGCGGACCT CACATTCCGC GTGGATGCCG TGATCAAGCG CGAGACTGAA
GTCATTCGAG CGCAGCTGCA ACGGAACCAG GTTGTACCGC TCGACGGTTA CGGGCGCTTT
GTGGATGCAC ATACGGTCGA GGTGGAATCG GCGGAAGGTA CGCGCCGCGT GACGTCGGAA
AACTTCCTGG TGTCCACGGG TACGCGGCCT GCGTCGGACC AGCACTACCA GCTCGATGGC
ACTCACATTT TCAACTCCGA CCAGTTGCTC TCGTTGAGCG AGGTTCCGCG CGAGCTGATC
GTGGTGGGCG CGGGCGTGAT CGGCCTGGAA TACGCGTCGA TGATCGCAGC GTTGGGCGTG
AAGATCACGA TCCTCGATGC GCGTCCGACG ATTCTCGACT TTATCGACCG CGAGATCATG
GACAGCCTGC AATTCCAGTT GCGACAACTC AATGTGATCT TCCGACTCGG TGAAAAGGTG
ACTACCTGTG TGTATGATGC CGAGCGCGGC CGGGTGATCG CGACCCTTGA AAGCGGCAAG
CGCGTGCACG GCGACGGATT GCTGTTTACG GTTGGACGGC AGGCGAATAC CGACAAGCTC
AATCTCGAGA GCGCGGGGCT GAAGACCGGC GATCGCGGCA AGCTTGAAGT CAATGAGCAG
TTCCAGACTG CGGTACCGAA TATCTACGCG GCGGGCGATG TGATCGGCTT TCCCGCCCTC
GCAAGCACGT CGATGGAGCA GGGAAGAATC GCGAGCTGCA ACATGTTTGG CGTGCCGTCG
AAGATGCGGC CGCAGTTTTT TCCGTACGGC ATTTATACGA TTCCGGAGAT CTCGATCGTT
GGGCAAACGG AAGAGCAGCT CACCCACGAT AAAGTGCCCT ACGAGGTCGG CATCGCCCGC
TACAGCGAAC TTGCGAAGGG ACAGATGCTC GGCGATGAGC ACGGGCTGCT CAAGCTGCTG
TTCCACAGCG AGTCTCTGAA GCTGCTCGGA GTGCACATCA TTGGCGAGCG CGCGGCGGAG
ATCATCCACA TTGGGCAGGC AGTGCTGAGC TTCGGCGGGT CGATCGAGTA CTTCCGCGAT
ACGGTGTTCA ACTATCCGAC GATGGCCGAG GCGTATAAGG TCGCTGCGTT GGATGGCCTG
AACAAACTTT GA
 
Protein sequence
MPNGYDYDLV VLGSGPAGQK GAICAAKLHK RVAIVENRWA LGGVCVHSGT IPSKTLREAV 
LYLSGFREKT FYGRSYQVKD RVVMADLTFR VDAVIKRETE VIRAQLQRNQ VVPLDGYGRF
VDAHTVEVES AEGTRRVTSE NFLVSTGTRP ASDQHYQLDG THIFNSDQLL SLSEVPRELI
VVGAGVIGLE YASMIAALGV KITILDARPT ILDFIDREIM DSLQFQLRQL NVIFRLGEKV
TTCVYDAERG RVIATLESGK RVHGDGLLFT VGRQANTDKL NLESAGLKTG DRGKLEVNEQ
FQTAVPNIYA AGDVIGFPAL ASTSMEQGRI ASCNMFGVPS KMRPQFFPYG IYTIPEISIV
GQTEEQLTHD KVPYEVGIAR YSELAKGQML GDEHGLLKLL FHSESLKLLG VHIIGERAAE
IIHIGQAVLS FGGSIEYFRD TVFNYPTMAE AYKVAALDGL NKL