Gene Acel_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1873 
Symbol 
ID4485271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2116546 
End bp2119065 
Gene Length2520 bp 
Protein Length839 aa 
Translation table11 
GC content72% 
IMG OID639730663 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_873631 
Protein GI117929080 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.7666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGTT GGGCGGAAGA CCCGGAACTG CTCGCCACGT TCCGTGCCGA GGTGGAGGAA 
AGGCTCGCCT CGCTGTCCGC TGGCCTGCTG CGGCTGGAGA CTGGAGCCGC CTCCCGGCAG
GTCCTCTCCG CGCTGTTCCG TGACGCCCAC ACGGTCAAAG GCTCCGCTCG GATGATGGGC
CTGACCGCCG TCCTGGAGAC CGCGCACGCC GCCGAAGACC TCCTCGCGGC ACTCCGCGAC
GGCCGGTTCC CGGTGCGACG CGATCTGGTT GACCTGTTGT TGGCGACGGT CGATGGCATC
AGCCGATCCC TGCCGGGCGA CCCGGCTCCG GTCGGTGAGG AGCATCTGCG GGCGCTCATT
GCCGCGCTGC GGTCGGCGCT GGACGGGGAA GAACCGGTGA CCGTCCCGCG GCTCCCGGAA
CCGACCGTCA CGGTCCAGAG TGGCCCCCAG CCTCTCGCCG TACCACCGCC GCCGGCGCGG
CCCGGCACCA CGCCCTCGGC TACCGAGACC CCGGCGCCGG CCGCGCAAGC CGCCGCCCCG
CCGTTCGCGG TCCCTCCGCC CCCGGACGGG CAAGCCGCCG GCCCACCCCT CGCGGTCCCT
CCGCCGCCCG CTGGGCCAAC CGGATCACCG GCAGGATCCA CGGCACGACC ACCTCGGCCA
GCGGGATCCG CCCCTCCTCC GGCGGGATCC GCCCCGGTCG GGAGGCCCTC CACCCCGACG
GCCACGCTCT CCACGCCGGC AGCCGCCGCC TCCACGCTGT TGGAGTCGAT CACCCCGCCT
GCCGCCGTCC AGATCGGCGG CCCGACAGAG CCGGAACGCG GCTTCGACGC CATCCGAGTC
GCCTCCCGCC GGGTCTACGA CCTGCTCGAC GTCGTCGGCG AAGCCGAGCT CGACGCCCGA
CGGGTGGAGC GCAACGCCAT AGAGCTCGAA ACACTCCTCA CCGAGCAGCA ACGATGGCTC
CGGGCGGTCC GCGCCGCCGC GACCCAACCA TCCGAGGACC TGGAGCTGGC CCTCCATCGC
CTTGTCGCGA CAAGCGATCA GCTGGTCGCC TCCGGGCACC AACTGCGCGA GCGGGTCGAG
GACGCGCGAA GCCGCCTCGC CCAGGTGCGA GACGGCGCGA TGGGCTTGGC GATGGTCCCG
GTCCGGCGCG TACTCTCCGG GTTTCCCCGA CTGGTCCGGG ACGTCGCCAG CGCCGGCGGC
AAGGACGTCG GACTCCGGCT GGTCGGGGAG GATGTCGAGC TTGACAAGAA GGTGCTGGAC
GCCATCGCCG ACGCACTCCG CCACTTGGTA ACCAACGCGG TCGACCACGG ATGCGAGACC
CCGGCCGAGC GGGTTGCCGC GGGAAAGCCT CCCCGGGCAA CCGTCACCGT GGAGGCACGG
TCAGCCGGCG GGACCGTCGT CCTGGAGGTG GCCGACGACG GCCGGGGCAT CGACGAAAGC
GCAGTCCGCC GCCAGGCGAT CGAACGCGGG CTCCTCCCGC CGGATAGCAC CGTGTCCGGC
CCGGCGCTTC TGCAGGTGCT CTTCGCACCG GCGTTCTCCA CCGCCCCGAC CGTGACGGTG
ACGTCGGGGC GTGGCGTGGG CTTGGACGTC GTCCGGACGG TCGTCGACGA ACTCGGCGGC
ACGATCGACA TCTACACCGA ACCGGGCCGC GGCACCCGCT TCGTCCTCAC CTTGCCGATC
ACACTCGGCG TCCTGCGCTG CCTGATCGCC CGGGTGGGAG CCGAACGGTA CGCCGTCCCG
GTGCCGAACG TCATTGAATC GATCAGCCTG CGCGACGTGC CGGTGGACAA CCTCGCCGGG
GCGCCGGTCG TCGTCCGTCA CGGCACCTCC GTGCCGCTGC TCGACCTCGG CGCGGCGCTG
GGCGTGGAGG GTGTCCGGGA TCCCCGCGCT GCCCTTGTCG TGCGCCAAGG CGGCGGCGAT
CTCGTCGCGT GGTCGGTCGA CCGGTTGGAG GGCGAGCTCG AGCTCGTCGT CAAGGACCTC
GGATCGTTCA TCGGGCGGTT GCCGCTCGTC ACCGGGGCGA CGATCGACGG CGATGGCACC
GTGGTGTGCC TCCTCGATCT ACGGGAGATG TCCGCCCGGA CCGGGGCGGC CAGCACCGCG
CAACCAGCGA CGGCGCCGCC CGAGCTGGAG ACGCCCCGAC CGCTGGGACG CCGGCCGCGA
ATCCTCGTTG TCGAGGATTC CGTCGGAGTC CGGGAGCTGG AGCGGGTGAT CCTGGAGGGT
GCCGGTTATG AAGTCACCAC CGCGGTCGAC GGGCTCGACG GGTTGGCCCG CCTGCGCACC
GAACTGCCCG ACCTCGTGCT GGCCGATGTC GAGATGCCGG GGATGGACGG ATTCACCCTT
ACCCGAACCA TCCGCCGGAC CCGAGGCTGG GAACACCTCC CGGTAGTGAT CATGACGTCG
CGAGGGGACG ACGGCGACCG GCGAGCCGGC ATGGAAGCCG GGGCGAACGC GTACCTGCTC
AAGAGCGAAT TCGATCAAGC GCAGCTGGTC GAGACGGTCG GCCGGCTCCT CGGGCGGTGA
 
Protein sequence
MGGWAEDPEL LATFRAEVEE RLASLSAGLL RLETGAASRQ VLSALFRDAH TVKGSARMMG 
LTAVLETAHA AEDLLAALRD GRFPVRRDLV DLLLATVDGI SRSLPGDPAP VGEEHLRALI
AALRSALDGE EPVTVPRLPE PTVTVQSGPQ PLAVPPPPAR PGTTPSATET PAPAAQAAAP
PFAVPPPPDG QAAGPPLAVP PPPAGPTGSP AGSTARPPRP AGSAPPPAGS APVGRPSTPT
ATLSTPAAAA STLLESITPP AAVQIGGPTE PERGFDAIRV ASRRVYDLLD VVGEAELDAR
RVERNAIELE TLLTEQQRWL RAVRAAATQP SEDLELALHR LVATSDQLVA SGHQLRERVE
DARSRLAQVR DGAMGLAMVP VRRVLSGFPR LVRDVASAGG KDVGLRLVGE DVELDKKVLD
AIADALRHLV TNAVDHGCET PAERVAAGKP PRATVTVEAR SAGGTVVLEV ADDGRGIDES
AVRRQAIERG LLPPDSTVSG PALLQVLFAP AFSTAPTVTV TSGRGVGLDV VRTVVDELGG
TIDIYTEPGR GTRFVLTLPI TLGVLRCLIA RVGAERYAVP VPNVIESISL RDVPVDNLAG
APVVVRHGTS VPLLDLGAAL GVEGVRDPRA ALVVRQGGGD LVAWSVDRLE GELELVVKDL
GSFIGRLPLV TGATIDGDGT VVCLLDLREM SARTGAASTA QPATAPPELE TPRPLGRRPR
ILVVEDSVGV RELERVILEG AGYEVTTAVD GLDGLARLRT ELPDLVLADV EMPGMDGFTL
TRTIRRTRGW EHLPVVIMTS RGDDGDRRAG MEAGANAYLL KSEFDQAQLV ETVGRLLGR