Gene Acel_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1308 
SymbolaroK 
ID4485463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1457364 
End bp1457882 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content70% 
IMG OID639730088 
Productshikimate kinase 
Protein accessionYP_873066 
Protein GI117928515 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0211808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGG TCGTCGTCCT CATCGGCCCG CCGGGGGCGG GCAAGAGCAC CGTGGGTCGT 
GCCCTGGCGT CCCGGCTCGC CGTCTCGTTC GAGGACACCG ACGACGTGAT CGAACAGCGG
GCGGGGAAGC GGATCGCGGA GATCTTTCTC ACCGACGGCG AGGCGGCGTT CCGGCAATTG
GAGAAGGCCG TCGTGGCGGA CCGGCTCGCC GCCCACACCG GCGTCCTCGC CCTCGGCGGC
GGTGCGATCT TGGACGACGA TACCCGAGCC CTGCTCGCCG ACCACACGGT GATCTATCTC
GAGGTGGAGT TCAGCGAGGC GGTCCGGCGG GTCGGTCTCA ATCGGGACCG TCCGCTCCTC
CTCGGCAATC CGCGGGCTCA GCTCCGCGCC TTGATGGACG CCCGCCGGCC GTTGTACGAA
CAGACCGCCA CTCACACCGT CGGCACGACC GGCCGGACGC CGGACGAGGT CGCGGACGAG
ATCGCCGCAC TGATCACGGT TCGCGAGGAG AACCGATGA
 
Protein sequence
MPPVVVLIGP PGAGKSTVGR ALASRLAVSF EDTDDVIEQR AGKRIAEIFL TDGEAAFRQL 
EKAVVADRLA AHTGVLALGG GAILDDDTRA LLADHTVIYL EVEFSEAVRR VGLNRDRPLL
LGNPRAQLRA LMDARRPLYE QTATHTVGTT GRTPDEVADE IAALITVREE NR