Gene Acel_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0088 
Symbol 
ID4485986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp91333 
End bp92019 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID639728851 
Producttwo component transcriptional regulator 
Protein accessionYP_871850 
Protein GI117927299 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACAC AGCTGCTTGT CATCGAGGAC GAGGAGTCAT TCTCCGAGAC TCTGGCGTAC 
ATGCTTCGCC GTGAAGGATT CGTCGTCCAC ACGGCAGGCT CGGGAACGGA GGGGCTGGAA
CTCTTTGAGC GGCAGGGCGC CGATCTCGTC CTGCTCGACC TCATGCTTCC CGGGCTGTCC
GGGACAGATG TCTGCCGTCG GCTGCGGGAG CGCAGCAACG TTCCCATCAT CATGCTGACT
GCTCGGGACA GTGAGGTCGA CAAGGTGGTC GGTCTCGAGC TCGGGGCCGA TGACTACGTG
ACCAAGCCTT TCTCGTCGCG CGAGCTGGTA GCCCGAATTC GCGCCGTGCT CCGACGTCGG
GACGGTGGCG GTGACGAACA GCGGACGACG GTCCTCGAGG CGGGTCCGGT CCGGATCGAC
ATTGACCGGC ACGTCGTACT GGTACGCGGC GCTCCCGTGC ATCTTCCGCT CCGGGAGTTT
GAGCTCCTCG AGATGCTGGT GCGTCACGCC GGACGGGTGC TCACCCGGCA ACAGCTCATC
GATCGGATCT GGGGCGGCGA TTACGTCGGT GACACGAAAA CCCTGGATGT CCATGTCAAG
CGGCTGCGCA GCCGCATCGA AGACGACCCT TCCGAACCGC GGCACTTAGT GACCGTTCGC
GGAGTTGGAT ACAAATTCGA GCCGTAA
 
Protein sequence
MVTQLLVIED EESFSETLAY MLRREGFVVH TAGSGTEGLE LFERQGADLV LLDLMLPGLS 
GTDVCRRLRE RSNVPIIMLT ARDSEVDKVV GLELGADDYV TKPFSSRELV ARIRAVLRRR
DGGGDEQRTT VLEAGPVRID IDRHVVLVRG APVHLPLREF ELLEMLVRHA GRVLTRQQLI
DRIWGGDYVG DTKTLDVHVK RLRSRIEDDP SEPRHLVTVR GVGYKFEP