Gene Acel_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0032 
Symbol 
ID4484692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp35932 
End bp36915 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content66% 
IMG OID639728792 
Producttransketolase, central region 
Protein accessionYP_871794 
Protein GI117927243 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGT TGGCCTTGGC GCGGGCGCTC AACCTTGGGC TGCGCAAAGC ACTCGAAGCC 
AACCCCAAGG TTGTCATCAT GGGCGAGGAC GTCGGCAAAC TCGGCGGCGT CTTCCGGGTC
ACCGACGGGC TCCAGAAGGA TTTCGGCGAA GACCGGGTCA TGGACACGCC GCTGGCGGAA
TCCGGGATCG TCGGAACGGC GATCGGAATG GCGCTGCGCG GATGGCGCCC GGTCTGCGAA
ATCCAATTCG ACGGATTCGT CTTCCCTGCG TACGACCAGA TCGTGAACCA GCTGGCGAAA
TTGCACTACC GGTCGGGCGG GCGGCTTCGC GTTCCGCTCG TCATCCGCAT CCCGTTCGGC
GGCGGAATCG GCGCGGTCGA GCATCACAGC GAATCGCCGG AAGCGCTCTT CGCTCACATT
CCCGGGCTGA AAGTGGTCGC CTGCTCCAAC GCCGCCGACG CGTACACGAT GATTCAGCAG
GCGGTGGCGT GCGACGACCC GGTGATTTTC TTCGAGCCGA AGCGGCGGTA CTGGGAACGC
GGCGACGTCG ATCTCGACAT TCCGTTGGAG GATGCGTTCC CGCTGCACGC CGCACGGGTT
GTCCGGGAAG GCCGTGACGC CACACTTCTC GCCTACGGAC CCTCAGTTCG GCTCGCCCTC
GACGCGGCGG CCGCTGCGGC TGAGGACGGT CGCGAGCTCG AGGTCATCGA CATTCGCTCG
CTCTCGCCGC TCGACTGGGA GACCGTGCAT CACTCGGTGC GACGCACCGG CCGATGTGTC
GTCATCCACG AGGCACCTGT GTTCGTCGGC TACGGCGCGG AATTGGCGGC GCGGGTCACG
GAACAGTGCT TCTACAGTCT GGAGGCCCCC GTGCTGCGCG TCGGCGGTTT CTCCATCCCG
TATCCACCCT CCCGACTCGA AGAGCACTAT CTGCCGGACG TCGAGCGGGT CCTCGACGCG
GTCGACCGCG TCTTTGCCTA CTAG
 
Protein sequence
MAALALARAL NLGLRKALEA NPKVVIMGED VGKLGGVFRV TDGLQKDFGE DRVMDTPLAE 
SGIVGTAIGM ALRGWRPVCE IQFDGFVFPA YDQIVNQLAK LHYRSGGRLR VPLVIRIPFG
GGIGAVEHHS ESPEALFAHI PGLKVVACSN AADAYTMIQQ AVACDDPVIF FEPKRRYWER
GDVDLDIPLE DAFPLHAARV VREGRDATLL AYGPSVRLAL DAAAAAAEDG RELEVIDIRS
LSPLDWETVH HSVRRTGRCV VIHEAPVFVG YGAELAARVT EQCFYSLEAP VLRVGGFSIP
YPPSRLEEHY LPDVERVLDA VDRVFAY