Gene Acel_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0004 
Symbol 
ID4484713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp4202 
End bp4696 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID639728761 
Producthypothetical protein 
Protein accessionYP_871766 
Protein GI117927215 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGACTG ATCACACCAA GTCGGCTGAT CACGCCGACG GCCCGGACCT TGCCCGGGCG 
GCACTGCGCC GCGCTCGGGA AAGGGCTCGG CGGGCAGGCC AGCCGCCACT CTGGTCGACG
CGCCGCGACC CGCAAACGTC GACTGGTGAG CCGGAACTTC TTGGTGCGTC GGTGCACCGC
ATTCTGCGCG ACCTCGGCTG GCTGGACCGG ATCACCATTA CGCGCCTGGT CGATGAGTGG
CCAAAGATCA TCGGACCTGA GCTGGCCCAG CACTGCCGGC CGGAGAGCTA CGACCGCGGC
GTGCTCCACA TACAGGCGGA TTCGACCGCC TGGGCAACAC AGCTTCGGCT TCTTCTACCG
CAGTTGACCG CCCGGGTCCA GGAGGCCGCC GGCGATCTTA TTCGGCTGGT CGATGTCAGA
GGACCGACCG CGCCGTCATG GCGCCACGGC CCGCTCCGGG TCCGCGGCGC CGGGCCACGC
GACACTTACG GCTGA
 
Protein sequence
MPTDHTKSAD HADGPDLARA ALRRARERAR RAGQPPLWST RRDPQTSTGE PELLGASVHR 
ILRDLGWLDR ITITRLVDEW PKIIGPELAQ HCRPESYDRG VLHIQADSTA WATQLRLLLP
QLTARVQEAA GDLIRLVDVR GPTAPSWRHG PLRVRGAGPR DTYG