Gene Aave_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3141 
Symbol 
ID4669129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3466823 
End bp3467857 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content70% 
IMG OID639824342 
Producthypothetical protein 
Protein accessionYP_971479 
Protein GI120611801 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.774643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCGG GCGTGCCCGC TTCCCGGGCA TGGCGGCGAG AAAGTTCGAG CATGAAGCAG 
CATCCGTTCG GCGCCCTGGC GCTGGCCGTG GCCGCCGCCG TCGCGGCCGC CTCCCCCGCA
GCGATGGCCC AGCAGGCCCC CGCCCCCAAA TCCGTGGCCG TGACGGCCAT CGTGGAGCAT
CCGGCGCTGG ACGCTATCCG CGACGGGGTG AAGGCGAGCC TGCAGGCCGC CGGCTACGAG
GAGGGCAAGA CGCTGAAGTG GCAGTACCAG AGCGCCCAGG GCAACACCGG CACGGCCGCG
CAGATCGCAC GCAAGTTCGT CGGCGACCAG CCCGACGCCA TCGTCGCCAT CGCCACGCCC
TCGGCCCAGG CCGTGGTGGC GGCCACGAAG ACGGTGCCGG TGGTCTTCTC CGCCGTGACC
GACCCGGTCG CCGCCAAGCT GGTGAAGAAC TGGGAACCCA CCAAGACCAA CGTGACGGGC
GTGTCCGACC TGCTGGCGCT GGACAAGCAG ATGGAGCTGG TCAGGCAGGT GGTACCGAAC
GCCAGGCGCG TGGGCGTGGT CTACAACCCC GGCGAGGCCA ATTCCGCCGT GGTGGTCAAG
GAACTCAAGG CCCTGCTGCC CACGATGGGC ATGACGCTGG TCGAGGCCGC CGCGCCCCGC
TCGGTGGACG TGGGCAGCGC CGCGCGCAGC CTGATCGGCA AGGCCGACGT GATCTACACG
AGCACCGACA ACAACGTGGT GTCGGCCTAC GAATCGCTCG TGAAGGTCGG CCAGGAGGCC
AGGCTGCCGC TGGTGGCCGC CGATGCCGAC AGCGTCAAGC GCGGCGCCAT CGCGTCGTAC
GGCATCAACT ACCGCGACCT GGGCGAGCAG ACCGGCCGCA TGGTGGTGCG CGTGCTCAAG
GGCGAGAAGC CCGGCGACAT CAAGCCCGAG ATCAGCACGA AGCTGGAACT CACGGTCAAC
CCCGGCGCGG CAGAGAAGCA GGGCGTGAAG CTCTCCGACG CGTTCGTGAA GTCCGCGGCG
CACGTCGTGA AGTAA
 
Protein sequence
MGSGVPASRA WRRESSSMKQ HPFGALALAV AAAVAAASPA AMAQQAPAPK SVAVTAIVEH 
PALDAIRDGV KASLQAAGYE EGKTLKWQYQ SAQGNTGTAA QIARKFVGDQ PDAIVAIATP
SAQAVVAATK TVPVVFSAVT DPVAAKLVKN WEPTKTNVTG VSDLLALDKQ MELVRQVVPN
ARRVGVVYNP GEANSAVVVK ELKALLPTMG MTLVEAAAPR SVDVGSAARS LIGKADVIYT
STDNNVVSAY ESLVKVGQEA RLPLVAADAD SVKRGAIASY GINYRDLGEQ TGRMVVRVLK
GEKPGDIKPE ISTKLELTVN PGAAEKQGVK LSDAFVKSAA HVVK