Gene Aave_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1180 
Symbol 
ID4668922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1301909 
End bp1302460 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID639822374 
Producthypothetical protein 
Protein accessionYP_969546 
Protein GI120609868 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG AATTCTCTCC CCAGCGCCTC GACGTCAAGG CATTCGCGCA GGCGGGCGGT 
CATCTGTCCG GCCATGATTC GCTCCTGAAA TACGAGCGGC TGGCCCAGGA GGCCAAAGGG
CTGCACCCTG ACCTGCTCGT GGACTGGACG GCCGACGGCG AAGTGCGGAC CACGCACGGC
ATCGGTGGCC AGGTATGGCT GCGGCTGCGT GTGCGCGCCG CGTTCCCCAT GACCTGCCAG
CGCTGCCTCG GGCCGGTGGA TGTCCCCCTG GAGGTCGATC GCGAATTCCG GTTCGTCGCC
GACGAGGCGA CTGCCGAGGC GCTCGACGAC GAGAGCGAGG AAGACCTGCT GGCTCTGAGC
CGCGAATTCA ATCTGCGCGA GCTGATCGAG GACGAGCTCC TCATGGCGCT GCCGCTCGTG
CCCCGGCACG ACGAATGTCC TTCTCCGGTG CGGATGGCCT CCAGCGGCGA GGATTTCGAG
GCGGCCAGCG CGGACAAGCC GAACCCCTTC GCGGCGCTCG CATCCCTCAA GACCGGCAAG
CCTGGGGGTT GA
 
Protein sequence
MTKEFSPQRL DVKAFAQAGG HLSGHDSLLK YERLAQEAKG LHPDLLVDWT ADGEVRTTHG 
IGGQVWLRLR VRAAFPMTCQ RCLGPVDVPL EVDREFRFVA DEATAEALDD ESEEDLLALS
REFNLRELIE DELLMALPLV PRHDECPSPV RMASSGEDFE AASADKPNPF AALASLKTGK
PGG