Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0114 |
Symbol | |
ID | 6377726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 132818 |
End bp | 134587 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642681306 |
Product | thiamine pyrophosphate protein domain-containing protein |
Protein accession | YP_001957291 |
Protein GI | 189501574 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGG AGAAGCTCAT ATTAGCTGAT GCACTCACTT TATTTTTAAA AGACCTAAAT ACTAAATTTA TATTTGGTGT AAGCGGAGCT AATATTGAAC ACCTGCATGA TTCGATTTAT AGATTAGGGG ATAACAAACT ATCAGCAATT TTAGCAAAGA GTGAATTTTC AGCCTCCTTT ATGGCTGATG GATATGCACG TACCCACAAT ACCTTGGGCG TATGTTGTTC GACATCAGGA GGAGCTATGG TCAACCTTGC CGTTGGTATA GCCGAGTCTT ATGCAGATAA TGTGCCCGTG TTAGCAATAA TTGGTCAATC ACCCACCTTT CTTGAAGGAA AGGGTGCTTT TCAGGATTGC TCAGGAAAAA CAAATACCCT AGATGGGTTA TCCTTTTGGC AATCTATTAC AAAATATGCA GTTAAGATCA CTCGGCCTGA ACAATTTTGG GATAGTGTTG AACAAGCATT AAAAAGTGCT TTTCATAAAA TTCCAGGGCC TACTGCATTA CTGATCCCTC GCGATTTATT TGAAGCTGAA GTACACCAGC GCCCTAACCA CCTTTCTACG AATTTAATTG ATTATCGTGC TATCCATCCT CATAAATCAT CTTCAATCCT AGCACTAAGA AAGTTATTAC AGCAGGCACA AAAGCCATTG ATGATAGTTG GCAAGTATGC AAAGTACTAT CAAGCTGCTG AGAGAATTAA AAATTTTGCT CATACTTTTA ATTGTATGGT GGTTACTACT TTAGCAGACG TTAATGCATT TGCTCATAAT CACCCTCTTT ATTTAGGAAT GGTAGGTATT TGTGGACATC TTAAAGCACA TGATTTTATA AAGGATGATG CTGATTTGAT TATTGTAGTT GAAGATGATT GTTCGGTCAT GACCACCACA GGTGTTATGA GTAGCTTAAA TAATACTCCA TTAGTTTATC TCGGTACTGA TTCAACCAAA GCATGTGCTG CAGTACAAGT TGATTTAGCC ATAGAAGGCG ATATACAACT TATTTTGGAC CAAGTACTAG CTGACTATAG CGGGCCTGCC TTAGCCAAGT ACGTACAGGT GAGCACTCCA ATGGAAAACC ACATCCAAGC TAATTCCCAC CTTCTTACTG ATAAACAGCA TGGCAATGCA GGCTTGTCGG TCAGTAATGC TATAGAGAGT CTAGCAAAGT TTCTACCTAA TGTGAATCAG GTCTTGTTTG ATGCTGGCAA TTGTGTGGCA GCGACCTCCC ATTTTCTAAA TTTTCCAGCA CATATAAAAA CTGTCATTGC ACTAGGTATG GGAGGAATGG GGTATGCTAT TCCGGCAGCC ATAGGCGCTC AATTAGGAAA CAATGCCGCT CAAAAAAGTA TGGTATTTAC AGGAGATGGA GGGTTTCTGA TCACTGGACT AGAAATACAA ACAGCTGTAG AATACAATTT ACCTGTCTTA TTTATAATCT TCAATAATAA TATGCATGGC ATGTGTGTTA CCCGCCAACA ATTATACTTT GATAAGCGTA TAACTGCTTC AAGCTATGGT AAAATTCATA TTGCTGATTT AGTAAAAGGG CTTGGTAGTC AAGAGAATCT TTGGTCTAGC TGTGTGGAGG ATATTCTAAG TTTGGAAAGT AGCTTACACG ATTATTATAC CCATCATAGT TGTAAGACAG GAGTATTAGA AATAAAAGTA ACAATCGAAG AACTACCTCC TTTTATCCCT TTTCTAGTGG CAAAAGGAGA GATGCAAGTA GACAATAATA AAATGTTGCA AAATGTATGA
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Protein sequence | MKPEKLILAD ALTLFLKDLN TKFIFGVSGA NIEHLHDSIY RLGDNKLSAI LAKSEFSASF MADGYARTHN TLGVCCSTSG GAMVNLAVGI AESYADNVPV LAIIGQSPTF LEGKGAFQDC SGKTNTLDGL SFWQSITKYA VKITRPEQFW DSVEQALKSA FHKIPGPTAL LIPRDLFEAE VHQRPNHLST NLIDYRAIHP HKSSSILALR KLLQQAQKPL MIVGKYAKYY QAAERIKNFA HTFNCMVVTT LADVNAFAHN HPLYLGMVGI CGHLKAHDFI KDDADLIIVV EDDCSVMTTT GVMSSLNNTP LVYLGTDSTK ACAAVQVDLA IEGDIQLILD QVLADYSGPA LAKYVQVSTP MENHIQANSH LLTDKQHGNA GLSVSNAIES LAKFLPNVNQ VLFDAGNCVA ATSHFLNFPA HIKTVIALGM GGMGYAIPAA IGAQLGNNAA QKSMVFTGDG GFLITGLEIQ TAVEYNLPVL FIIFNNNMHG MCVTRQQLYF DKRITASSYG KIHIADLVKG LGSQENLWSS CVEDILSLES SLHDYYTHHS CKTGVLEIKV TIEELPPFIP FLVAKGEMQV DNNKMLQNV
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