Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0112 |
Symbol | |
ID | 6377709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 129020 |
End bp | 131332 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642681304 |
Product | cyclin domain-containing protein |
Protein accession | YP_001957289 |
Protein GI | 189501572 |
COG category | [A] RNA processing and modification [T] Signal transduction mechanisms |
COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG CTTATTCAGT AGCCCAGCAA TATATAAACT ATGTTTTATT TGTAAGCTTA TTTTTACAAA GCTGCTGTGG TCTCAATAAT CCACTTATTC CAATTCGAAA GGAACAAACA GCACCTATAC GAACTGATGT ACAAGAATTA ATACCACAAA TCAACATTGA GTCTTTAATA GGTCAAGAAC TTATAGCCCA AGGAGAGCAT ATTGTTACTT TTTATAAAGA AGCAGGTAAG GTAAAAGCAA ATGTAAAGAT AAATGCACCA AAAGGGTTTA GTAAATTCCA CGTGGGAGCA GAAGTATTAT TAGAAAAAGA AGCAGAATGT ATGAATTTAT CTCGGTTAAA TAAACAAGCA CAACTCCGCC GCATCCATTT CCAATCAGGG CAAGTGGGTC AGCCTGCTAA AGTAATTATC TATAAGAATG CAGGATTGAT GGGAGGTGGA AATATTATTG TTAAGCAACA GAGCAATCCA GACGAAGAAG AAGATTATGA AGATGAGGAA ACAGAGGAGC AAACAACAGA AGAAGAAAGA GAACATAAAG GAAAAAGGGA AGAGGAGGTA AAAACAGACG GGAAAATACA AAAACAAACA TCTGTAATAT TTAAGCCAAG AAGAGGATAT CAAGAGGAAG CTACACTTCA GGCAGATAGT AATACGGGAA GTTATCAAGC TTTGTTAACA GCAGCTATAA ATGGAAATGT AGAAGCGCAG CTCCAGCTAG CACAAAAGTC ATATCAGGAA ACACTAATAT GTTTGCATAA AGCCGTGGTC CAAGATTATA GAGGTGCCAC GATGTTATTA AAAAAGATAA AGCTATCTAA TATTGGTCAG GAGGCGCAAG AACGAGAGAT TCCTATAGAA ATATGGGGCA GAATCTTATC ACATGTACCG TTAGAAGATA TATTCTCTGC TAGATTAGTT AATCACCTTT TTTATGAGCT TATTACAGGA GATAGGAGCA TAGGTATGAT TGGGCTAAAA AATAAGCTTA AGCCTATAGC ACATGGATAC CGTTGTGCAA TAGACAAAAT TATACATTTT CGTAGTGATA AACTAGTCAA ACTTACACCC CAAACCATAC CTAGCTTTCC TTTTTATTGT TTAATGAGAC ATGTTACGGA TTTACCAGTA GCCTTTTACC CACATTTAAA AGATACGGAT ATACATACGC TTGAGTTAAG AAATAAAGCA GGAGCAAAAA GGGCAATAGA ATTAGCTAGA GCGCTACAAG GGACGCAGGT GCATACGCTT AATTTAAGGT TTAACGAAAT AGGAGCAGAA GGGGCGATAG AAGTAGCTAA AGCGCTACAA GGAACGCAGG TGCATACACT TGATTTGGTC TATAATCAAA TAGGAGCAGA AGGGGCGATA GAAGTAGCTA AAGCGTTACA AGGGACGCAG GTGCATAAAC TTGATTTAAG TAATAATCAA ATAGGAGCAG AAGGGGCGAT AGAAGTAGCT AAAGCGTTAC AAGGGACGCA GGTGCATACG CTTAATTTAA TGGGAAATCA AATAGGTAAT GAAGGTGCGA TAGAATTAGC TAAAGCGCTA CAAGGGACAC AGGTGCATAC GCTTTATTTA AGACGTAATC AAATAGATAA TGAAGGGGCG ATAGAAGTAG CTAAAGCGTT ACAAGGGGCT CAGGTACATA CGCTTAGTTT AAGCGATAAT CAAATAGGAG CAGAAGGGGT AATAGAATTA GCTAATGCAC TACAAGGGAC TCAGGTACAT ACACTTTATT TAAGTCATAA TCAAATAGGT AATGAAGGGG CGATAGGATT AGCTAAAGCG TTACAAGGGG CTCAGGTATA TACACTTGAT TTAAGTCATA ATCAAATAGA TAATGAAGGG GCGATAGGAT TAGCTAAAGC GTTACAAGGG ACGCAGGTGC ATAAACTTGA TTTAAGTCAT AATCAAATAG ATAATGAAGG GGCGATAGGA TTAGCTAAAG CGTTACAAGG GACGCAGGTG CATAAACTTG ATTTAAGTCA TAGTAAAATA GATAATGAAG GGGCGATAGG ATTAGCTAAA GCGTTACAAG GGACGCAGGT GCATACGCTT AATTTAATGA TTAATGAAAT AGGTAACGAA GGGGCAATAG GATTAGCTAA AGCGCTACAA GGGACACAGG TGCATACGCT TGATTTAATG GCTAATGCAA TAGGTAACGA AGGGGCAATA GGATTAGCTA AAGCGCTACA AGGGACACAG GTACATACGC TTGGTTTAAG CGCTAATCAA ATAGGCAATG CTACAAAACA ATTACTTGTC GAACAATATC CTCATATTAA GTGGAAGTTT TAA
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Protein sequence | MKKAYSVAQQ YINYVLFVSL FLQSCCGLNN PLIPIRKEQT APIRTDVQEL IPQINIESLI GQELIAQGEH IVTFYKEAGK VKANVKINAP KGFSKFHVGA EVLLEKEAEC MNLSRLNKQA QLRRIHFQSG QVGQPAKVII YKNAGLMGGG NIIVKQQSNP DEEEDYEDEE TEEQTTEEER EHKGKREEEV KTDGKIQKQT SVIFKPRRGY QEEATLQADS NTGSYQALLT AAINGNVEAQ LQLAQKSYQE TLICLHKAVV QDYRGATMLL KKIKLSNIGQ EAQEREIPIE IWGRILSHVP LEDIFSARLV NHLFYELITG DRSIGMIGLK NKLKPIAHGY RCAIDKIIHF RSDKLVKLTP QTIPSFPFYC LMRHVTDLPV AFYPHLKDTD IHTLELRNKA GAKRAIELAR ALQGTQVHTL NLRFNEIGAE GAIEVAKALQ GTQVHTLDLV YNQIGAEGAI EVAKALQGTQ VHKLDLSNNQ IGAEGAIEVA KALQGTQVHT LNLMGNQIGN EGAIELAKAL QGTQVHTLYL RRNQIDNEGA IEVAKALQGA QVHTLSLSDN QIGAEGVIEL ANALQGTQVH TLYLSHNQIG NEGAIGLAKA LQGAQVYTLD LSHNQIDNEG AIGLAKALQG TQVHKLDLSH NQIDNEGAIG LAKALQGTQV HKLDLSHSKI DNEGAIGLAK ALQGTQVHTL NLMINEIGNE GAIGLAKALQ GTQVHTLDLM ANAIGNEGAI GLAKALQGTQ VHTLGLSANQ IGNATKQLLV EQYPHIKWKF
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