Gene Aasi_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0100 
SymbolrpsT 
ID6376624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp117111 
End bp117362 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content35% 
IMG OID642681292 
Product30S ribosomal protein S20 
Protein accessionYP_001957277 
Protein GI189501560 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACC ACCAATCAGC ACGCAAAAGA ATAAGGGCTA ATGAGGCTAA ACACCTACAT 
AATAGATATC AATTAAAAAC CTGTAGGACA GCCATTAAAC AGCTTAAGCA AGTTAAAGAT
AAAGAACAAG CAGTAACACT TTTTAAAACT GTTGTTGCCA TGCTTGATAA ATCTGCTAAA
CGACATATTA TTCATAAGAA TAAGGCTGCT AATACTAAGT CTAAGCTAGC GCAACATATT
AATCGTCTAT AA
 
Protein sequence
MANHQSARKR IRANEAKHLH NRYQLKTCRT AIKQLKQVKD KEQAVTLFKT VVAMLDKSAK 
RHIIHKNKAA NTKSKLAQHI NRL