Gene Aasi_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0097 
Symbol 
ID6376682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp113051 
End bp113815 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content32% 
IMG OID642681289 
Producthypothetical protein 
Protein accessionYP_001957274 
Protein GI189501557 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACTA CTACTCCCCA AAACAGGAAT ACTTCAAAAC TACGCTATCA AGAGATTGAT 
ATACTACGCG GTATAGCAGC TTTAAGTATG ATTGCATTTC ATACTACTTT TATAATTCAA
ACTATTTTTA AAAAACATAT AAGCTCAAGC TTATTGTTTT GGCAAGGTAC ACCTATACTC
ATAGGAGGAA CATTTATTAT TTTAGCAGGT TTGTCACTGT ATATAGCAGT ACAAAAGGGT
AAATATTCTA ACCCTCTAGT ACTACTACAA AGAAGCGGAT CTTTATTTTG TCTCGGCATC
TTAATTACCG TTAGTACTTA TTTATTAAAT ATAGGTGGCG TAGTATATTT TGGTATCCTG
CATTGTATAG GATTATCTAC ATTTATTAGC TTTTATTTAT TATCCTTGCC TAAATATATT
CTTTTAGTAA TGGGATTACT ACTAATTGGC ATAGGCATGT ATTGGAACTT TAACCAGTCA
CTTTGCTTAC ATACTAGCCT TTTTTGGTTG TATCATTGCC ATTGTGCTAG CTTAAGGCCG
ATGTTAGATT ATTATCCTCT TGTCCCATGG CTAGGGTTTA TGTTAGTAGG TATTGTTTTA
GGAAAGCAAT ATTATCCTAA AGGGGAATGT GTTTTTTATC TTAGGATATT TTCTAAAGTG
GCTTTTTATA CGCGTCCCAT TAGCTTTTTA GGCAAGCACT CTTTGTTTAT TTATTGCATC
CATACACCCA TTATCTTTAT TATACTATAT TTAATACTGG CATAA
 
Protein sequence
MVTTTPQNRN TSKLRYQEID ILRGIAALSM IAFHTTFIIQ TIFKKHISSS LLFWQGTPIL 
IGGTFIILAG LSLYIAVQKG KYSNPLVLLQ RSGSLFCLGI LITVSTYLLN IGGVVYFGIL
HCIGLSTFIS FYLLSLPKYI LLVMGLLLIG IGMYWNFNQS LCLHTSLFWL YHCHCASLRP
MLDYYPLVPW LGFMLVGIVL GKQYYPKGEC VFYLRIFSKV AFYTRPISFL GKHSLFIYCI
HTPIIFIILY LILA