Gene Aasi_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0074 
Symbol 
ID6376479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp88955 
End bp90172 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content33% 
IMG OID642681266 
Producthypothetical protein 
Protein accessionYP_001957252 
Protein GI189501535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATACTG CATTTTTCAT TGCTAGAAGA ATAAGAAAAG CTAATAAGAA AGCATTTACC 
ACGCTTGCTC AAAGGATAGG GATGCTAAGC GTTGCACTAG GGCTTGCTAT ATTACTTCTA
GCATTTCTGG TCATCAATGG TTTTCAAAAA AATGTTGAGG AAAAACTTAC AAGCTTTCAA
GGCCAATATC AGGTATTCAA ATATTCTTTG AGCAGATCTA TTGAAGAGCC GCCAATACCT
ACCAGTAAAG TACAAGGGAT CCAAGAAGCT TTTCCAAATC ATATAAAATC TATTCAGGCT
TTTATTCACA AGACAGTACT TATACAAAGT AAAGAAAATT TAGAAGGTAT AATATTAAAG
GGCGTAGAGC CTCAAGCTAA GTACGCACCA TTTACTCATT ATTTGGTAGC TGGAAATCTA
ATGACACCCA GACAATCTAA ATACAACCAT GAAATTGTAT TAAGTACTAC AACAGCAGCA
AAGCTTAATG TTCAGATTGG AGATCAAGTA ACCATTTGCA TATTGCAAGA AACTCCTCGC
TACCGAAAAT TAAAAGTGGT AGGCTTATAT ACGACCCACT TGGAAGGGTT AGATGAAAAA
ATAGCCTTAT GCGATATAAA GTTATTGCAA CATCTTAATA ATTGGCCCGA TAACTTGGTC
GGAGGGTATG ATATATTTTT AAAAGAGCCA CATCATAATA CGTTATTAAC AGATAAATTT
CTTGATTGGC TCGGCTATGA CTTAGATGTA AAAAATATTG AACAAGCTTA TCCGGCAATT
TATGATTGGT TGGCTATGAT GAAAAAGGAT GTATTGATAT ACTTAATACT TATTTTGCTG
GTAGCCAACT CTAATATAAT TTCTATTGTG CTTATACAAA TTATGGAGCG TACTAACATG
ATAGGATTAC TTAAAACCAT GGGAGCCACT GATAGTTTAA TATATCGTAT ACTGCTATGG
AACAATATGT ATTTAATTTT AAAAGGTATG TGGTGGGGAA ATCTAATAGG TATTGGTTTA
GCATTTTTAC AATATTATTT TAAAATTCTG CAGTTAGATC CTACGTATTA TTATATAGCT
TATGTACCAA TTGCATGGGA TTATAAGACG ATTGTAGTTA TTAATCTGCT CTTATTTATA
TTGGTTAGTG CTGTACTGTT AGTTGCTATA TCTATTATTG CTAAAGTAAA GCCCATTAAG
TCTATTCAAT TACGATAA
 
Protein sequence
MHTAFFIARR IRKANKKAFT TLAQRIGMLS VALGLAILLL AFLVINGFQK NVEEKLTSFQ 
GQYQVFKYSL SRSIEEPPIP TSKVQGIQEA FPNHIKSIQA FIHKTVLIQS KENLEGIILK
GVEPQAKYAP FTHYLVAGNL MTPRQSKYNH EIVLSTTTAA KLNVQIGDQV TICILQETPR
YRKLKVVGLY TTHLEGLDEK IALCDIKLLQ HLNNWPDNLV GGYDIFLKEP HHNTLLTDKF
LDWLGYDLDV KNIEQAYPAI YDWLAMMKKD VLIYLILILL VANSNIISIV LIQIMERTNM
IGLLKTMGAT DSLIYRILLW NNMYLILKGM WWGNLIGIGL AFLQYYFKIL QLDPTYYYIA
YVPIAWDYKT IVVINLLLFI LVSAVLLVAI SIIAKVKPIK SIQLR