Gene Aasi_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0052 
Symbol 
ID6376323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand- 
Start bp69545 
End bp69994 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content37% 
IMG OID642681248 
Product50S ribosomal protein L13 
Protein accessionYP_001957234 
Protein GI189501517 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACAT TAAGTTATAA AACACAATCA GCTAATAAGC AAACCATCGA CAAATCTTGG 
ATTCTTGTTG ATGCCAAAGG CCAAACTTTA GGAAGATTAG CTAGCCAAAT AGCTGCTATT 
ATACGTGGTA AGAATAAGCC TTATTTTACT CCCCATATAG ATTGTGGAGA TAATGTTGTA 
GTTGTCAACG CAGAAAAGAT AAGGTTGACC GGTAAGAAGT GGGATAATAA ACAGTATATT 
TCTCATACAG GTTACCCAGG AGGCCAGCGG ATAACTACAC CTCGTAAGCT TAGAGAAGAA 
TTTCCTACGC GTATGATAGA ACATGCTGTA CGCTGCATGC TACCTAAAAA TAAACTAGGT 
CGTAGATTAT TTCATAATTT ATTTGTATAT GCTGGCCAAG ATCATGCACA TAGTGCTCAG 
CAACCCAGAG AAATTAAGTT AACTTACTAA
 
Protein sequence
MDTLSYKTQS ANKQTIDKSW ILVDAKGQTL GRLASQIAAI IRGKNKPYFT PHIDCGDNVV 
VVNAEKIRLT GKKWDNKQYI SHTGYPGGQR ITTPRKLREE FPTRMIEHAV RCMLPKNKLG 
RRLFHNLFVY AGQDHAHSAQ QPREIKLTY