Gene Aasi_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0049 
Symbol 
ID6376510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp67133 
End bp67966 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content38% 
IMG OID642681245 
Producttranslation elongation factor Ts 
Protein accessionYP_001957231 
Protein GI189501514 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTA CAGCACAAGA TATCAATAAA TTACGGCAAC TAACAGGCGC CGGTATGATG 
GATTGTAAAA AAGCACTTAC AGAAGCACAA GGTGATATTG ATAAAGCTAT TGAGCTACTT
AGGAAAAAAG GACAAAAAAT AGCTGCTGCC CGTGCCGGAA GAGACACTAC AGAAGGATTT
GCATTAGCCG ATGTCAATGC ATCTGCTGAT CATGGAGCCA TCATAGCATT AGGTTGTGAG
ACAGATTTTG TAGCTAAAAA CGATTTGTTT CAACAAATAG CACAACAAAT TTTATCACTT
GCCTTAGCTC AGCAACCAGC CACTATCGAA GATTTAAAAC AGCTCGAAAT AGACGGACTT
ACAGTACAAG AACGTATTAC AGAATTAGTG GGTAAAATGG GCGAAAATAT AACATTAAGT
GCTTATGAAA CCTTGTCTGC AGAAGTAGTA GTTCCTTATA TACATACAGG TAATAAATTA
GCGGTTTTAG TTGCTTTACA AGGCGCTAAA GGAGAAGATG TAGTAGTAGC GGGTAAAGAT
GTTGCTATGC AAATTGCAGC GCTTAATCCT ATTGCCATAG ATAAAGATGG TGTTTTTACT
AGCGTTATTG AGCAAGAATT AGCAATTGCT AGAGAACAAG CTATTCGTGA AGGTAAGCCA
GAAGCCATGT TAGAAAACAT TGCACAAGGC AGGCTCAACA AATTCTTTAA AGAGAATACA
TTAGCCAACC AGCCTTTTGT AAAAGATAAT ACTTTGACAG TAGCACAATA CTTGACAAAA
ATTGCTGCTG GCTTGGTTGT CAAGAATTTT AAAAGAGTAT TAGTAGGAGC CTAA
 
Protein sequence
MAITAQDINK LRQLTGAGMM DCKKALTEAQ GDIDKAIELL RKKGQKIAAA RAGRDTTEGF 
ALADVNASAD HGAIIALGCE TDFVAKNDLF QQIAQQILSL ALAQQPATIE DLKQLEIDGL
TVQERITELV GKMGENITLS AYETLSAEVV VPYIHTGNKL AVLVALQGAK GEDVVVAGKD
VAMQIAALNP IAIDKDGVFT SVIEQELAIA REQAIREGKP EAMLENIAQG RLNKFFKENT
LANQPFVKDN TLTVAQYLTK IAAGLVVKNF KRVLVGA