Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0047 |
Symbol | |
ID | 6376298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 64244 |
End bp | 66004 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642681243 |
Product | ABC transporter-like protein |
Protein accession | YP_001957229 |
Protein GI | 189501512 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.99996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAATA AATATAAGTC ACCTTACAAA ATTTTAGAAT ATAGGCTGCT TAGCAAACTA TTTCATTTTA TAAAACCATA TCAACTGGTT TTTTACATAC TTATATTTCT AACACTTGTT ATAGGTATTG TAGAGCCTAG TAGACCATAT ATGATACAAA TTGCTATTGA TAAACACATA GCTTTGAAAG ATCATATAGG TTTATTGGTT ATTATTCTAT GGATGTTAGG ATTGTTATTC TTACAAACAC TCTCTCAATA TATTCTTGTT TATTTATCTG ATTGGCTTGG CCAGCATGTG GTTAAAGATA TACGTACAAA GATCTACACT CATGTTATCC AGCTAAATGC TACCTTCCAT AATAACACAC CTGTCGGAAG GCTTGTAATG CGTAATATTT CAGATACAGA AAAGCTACTA GATGTATTTA GCCATGACTT TGCAGCAGTT TTAGCAGATT TGCTACAGCT TATAGCTATG GCTGCTTTTA TGCTTTATAT CAATTGGAAG CTAGCACTCT TAAGTTTGAC TACTGTACCA CTACTGATAG CAGGGACTTA TCTTTTTAAA AAGAAGATTG CAAGTGCTTA TAAGGAAGTA AACGATGTAG CAACTAAGCT TAATTCTTTT ATACAGAGCC GAATTACAGG CATGAGTATC ATACAGATAT TTAATAGGGA GGACGCAGAG CTAATAAATT TCAAAATGCT TAATGAGGCT TATAGAAAGG CAAATGATAA ATCAAACAAG TATTATTCGC TGTATTATCC ATCTTTAGAA ATTATGCGTG CCATTGGTAT GAGTTTACTA ATCTGGTATG GTGCTAAAGG TGTTATCAAT CAAGTAACCA CGTTAGGTAG TCTAACTGCC TTTCTAATGT ATATCAAGAT GTTTTTTAGG CCAGTCTCCC ATTTAGCAGA ACATTTTAAT ACATTACAAA TGGGACTAGT TAGCAGCGGC AGAATTATGG AGTTATTAGA CAACAAGGAA ATAGTAAAAA ATACCGGTAC TTACCAGCCA CAACATATCC AAGGCAACAT TAGTTTTAAA GGTGTTTGGT TTGCTTATAA AGAACAAGAT TATATTCTTA AAGATTTGAA TTTTGAGGTT GCAGCCAATA AATCTTTAGC TATAGTAGGA GCTACTGGAG CTGGTAAATC CACTACTATC AATCTGTTAG AAAGGTTTTA TGAGCCTCAA AAGGGAATTA TTGAAATAGA TGGAGTAAAT ATACTAGATT ATGAAATACA TAGCCTACGT AAACATATAG GGTTGGTTTT ACAAGATGTA TTTCTGTTTT CTGCAACCAT TTATGAAAAT ATAACCTTGG GTGATCATAC TATTTCTAAA GAGCGTGTTG TAGAAGCAGC TAAAATGGTA GGTATTCATA CATTTATTCA ACAACTACCA GGTAACTATG ATTATAAGGT TGGAGAGAGG GGCATATCGC TTTCTATGGG ACAAAGGCAG CTTTTAGCTT TTGCACGTGT TTTAGTATAT AACCCTAGCA TTATCATTCT AGACGAAGCT ACTGCATCTT TGGACACTGA AAGTGAAAAA CTAATACAAC AGGCTACATT GACAGTGCTA GCTAATAGAA CAGCTATTAT TATAGCTCAT AGACTAAGTA CCATACAACA TGTAGATGAT ATATTGGTAC TTGATAAAGG GGAAATTAAA GAGCAAGGAG CCCACCAAAG CTTACTAGCA AAAGATGGTT ACTATGCAGC ATTACACAAG GTTCAGCAAC AAATAGCTTA A
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Protein sequence | MLNKYKSPYK ILEYRLLSKL FHFIKPYQLV FYILIFLTLV IGIVEPSRPY MIQIAIDKHI ALKDHIGLLV IILWMLGLLF LQTLSQYILV YLSDWLGQHV VKDIRTKIYT HVIQLNATFH NNTPVGRLVM RNISDTEKLL DVFSHDFAAV LADLLQLIAM AAFMLYINWK LALLSLTTVP LLIAGTYLFK KKIASAYKEV NDVATKLNSF IQSRITGMSI IQIFNREDAE LINFKMLNEA YRKANDKSNK YYSLYYPSLE IMRAIGMSLL IWYGAKGVIN QVTTLGSLTA FLMYIKMFFR PVSHLAEHFN TLQMGLVSSG RIMELLDNKE IVKNTGTYQP QHIQGNISFK GVWFAYKEQD YILKDLNFEV AANKSLAIVG ATGAGKSTTI NLLERFYEPQ KGIIEIDGVN ILDYEIHSLR KHIGLVLQDV FLFSATIYEN ITLGDHTISK ERVVEAAKMV GIHTFIQQLP GNYDYKVGER GISLSMGQRQ LLAFARVLVY NPSIIILDEA TASLDTESEK LIQQATLTVL ANRTAIIIAH RLSTIQHVDD ILVLDKGEIK EQGAHQSLLA KDGYYAALHK VQQQIA
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