Gene Aasi_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0011 
Symbol 
ID6377749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp13770 
End bp15353 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content33% 
IMG OID642681211 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_001957197 
Protein GI189501480 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTAA TAAAAAGAAC AGACAAAATA GTTTTAACAC CTTTTATCAA GTTATTTATA 
CTTGTACTTT CCGTAACTGT ATTCATTATG TTGATGCAGT TTTTTCTCAT ATACTTTGAT
GAATTAATCG GAAAGGACCT AGGGTTTTGG GTTTACGTTC AGCTTTTTTG CTATTTTGGT
ATTAATGCCA CTCCCATGGC TTTTCCATTA GCTACGTTGG TATCCTCGCT CATGGTATTT
GGCAGTTTAG GAGAGCAGCT AGAGCTAACG GCATTAAAGA GTGCAGGCAT ACCCTTTATA
CGCATATTAA GACCTTTACT ATTCTTAGTA ACCTTATTAA GTATATTTGT ATATTTCTCT
AACGGCTATA TTGTACCTAA AGTAACTGTA AAAGCACACA CACTGTTATA TGATCTTAGA
AAAAAGAAAC CTTCTATAGC TATTAAAGAG GGCGTATTTT ATAATGGCAT CCCGGATTAT
AGTATTCGAG TAGAAAGAAA GCTGCCTGAC CAAAAAACCT TAGAAGATAT TGTCATCTAT
GACCACACTA AAAACAAAGG GAATGTGCAT ATGACTACTG CATCTTTTGG TCAGCTAACG
ACCATCAACA ATGGGCAATA CCTGGTAATA GAATTGTTTA ATGGACATAA TTATTTAGAA
AAGCTACCAG AAAAAAAAGA TAATAAAACA AGTACAGCCT CTAGTAAGGT TATTATTCCT
AACTTTTATA GAACAAGTTT TAAAGCTCAA AAGGTTCTTA TTGATTTAGA TGCATTTAAA
CTGACAAGAA CCAATGAAAA ATATTTTACT TACTATCATA GTACTAAAAC CACAAAGGAA
ATCATCAAAG ATATTAGTAA AATGCAGTCA AGAATCAAGA AAAATCAAAC ATCTATATTA
AAAGATTTCC AAAAGCATTA CCATTTACCT GCACTCGATC ATACAAACTT ACCAGCCAAT
CATAAAGAAA CGGCTGCTGT AGATAATATA GATATAACAG ATACAAGTAG CCATCAGGCT
TTATCGTTAC AAACAGACTC AAAAACTATT ATTGCCCCTA GCGTACAAGA GGATAACGTT
GTTAGCAATA AAATACCTAT TACACACGAC TTAGCTAACA ACCCTAAACG CTCACAAATT
ATTCAAAAAG CATTAGAGCA AGTAAAAGAG CTTAGATATA AGATACAGCC ATATACCAAT
AAGATTACCT CTGTAGATAG AAAATTAAAA GAATTTCAAA TTGAAAAAAA TAAACGCACT
TCTTATGCCA TAGGCTGTAT TCTTATGCTT TTAATAGGTG CTTCTTTGGG GGCTTTAATA
AAAAAGGGAG GTTTTGGCAT ACCACTTCTT ATATCGACTG TATTTATACT ACTGTATTAT
ATGGTAGACA TATTTGGCAC AAAATGGGCA AAAGTAGACA TAATAGACAC AATAAGTGGT
GCTTGGGCCC CTAATATTGT ATTGCTTCCT TTTGGGTTAT TCTTCCTAAG GCAAGCACAA
AAAGATACCC GTCTATTAGA AGGAGATGCC TATCGTATAT TCTGGAGAAA GCTAAAAAAA
TCTATAGCAC GTAGAAAAAA GTAG
 
Protein sequence
MTLIKRTDKI VLTPFIKLFI LVLSVTVFIM LMQFFLIYFD ELIGKDLGFW VYVQLFCYFG 
INATPMAFPL ATLVSSLMVF GSLGEQLELT ALKSAGIPFI RILRPLLFLV TLLSIFVYFS
NGYIVPKVTV KAHTLLYDLR KKKPSIAIKE GVFYNGIPDY SIRVERKLPD QKTLEDIVIY
DHTKNKGNVH MTTASFGQLT TINNGQYLVI ELFNGHNYLE KLPEKKDNKT STASSKVIIP
NFYRTSFKAQ KVLIDLDAFK LTRTNEKYFT YYHSTKTTKE IIKDISKMQS RIKKNQTSIL
KDFQKHYHLP ALDHTNLPAN HKETAAVDNI DITDTSSHQA LSLQTDSKTI IAPSVQEDNV
VSNKIPITHD LANNPKRSQI IQKALEQVKE LRYKIQPYTN KITSVDRKLK EFQIEKNKRT
SYAIGCILML LIGASLGALI KKGGFGIPLL ISTVFILLYY MVDIFGTKWA KVDIIDTISG
AWAPNIVLLP FGLFFLRQAQ KDTRLLEGDA YRIFWRKLKK SIARRKK