Gene AFE_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0998 
Symbol 
ID7134284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp911295 
End bp912026 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content45% 
IMG OID643529396 
Producttranscriptional regulator, putative 
Protein accessionYP_002425471 
Protein GI218665577 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000689636 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAC ATGAAAGAAT CAAGTTTGCC ATCAAGCAAT CCGGGTTTAC ACAGAATGCC 
TTGGCCGAAA AGCTGGGGAT TTCTCGTGGA TCTATATCAC AATGGGTTTC TGGAAATATT
GCCACCAGAA CCGTTCCCTC GAGGGAAAAC CTTTTCCGCC TAGCCGAATT GTCTGGTGTA
CCCATTGAGT GGCTATGGAG TGGACGCGAA TCCGCAGCGC ACAAACCACA GAAGCCGGAA
GGTAGTCTGA GTGTTTCAGA ATATCAAGAC GAAGAAGGTT TAGGTGATGG TGAGGTAGAA
ATCCCCGCCT TGAATTTACA GGTTGGTGCG GGCAGCAGAA TTGTATGCGA AACAATACAA
GAGGAGCGTA AATTTCGATA CGCCAGATCT TGGCTTCAAA AATACGGCCT TGACAGTAAG
TATCTGTTTA GAGTCAGGGT TTATGGTGAC TCAATGGAGC CGTACATCAA AAACGGAGCG
TGGATCACTG TTGACAAAAG CCGAACCAAC ATACAAAACG GAAAAATATA CGTTCTAAGG
TCAGGCGAAG AAATACAAGT AAAGGCTCTA TTTAAGCGCC CGGATAGCGG TATTATTATT
CGTTCCAACA ATCCAGCTTA TCCAGATGTG CAAGTGTCCG CAACGGATAT GGAGCACATC
GCCATTATTG GTGAGGTTAT TGAGTTTAGT GTGACATTGA TATCGCCAAT CAAAAACGGT
TCGACGATTT AA
 
Protein sequence
MELHERIKFA IKQSGFTQNA LAEKLGISRG SISQWVSGNI ATRTVPSREN LFRLAELSGV 
PIEWLWSGRE SAAHKPQKPE GSLSVSEYQD EEGLGDGEVE IPALNLQVGA GSRIVCETIQ
EERKFRYARS WLQKYGLDSK YLFRVRVYGD SMEPYIKNGA WITVDKSRTN IQNGKIYVLR
SGEEIQVKAL FKRPDSGIII RSNNPAYPDV QVSATDMEHI AIIGEVIEFS VTLISPIKNG
STI