| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0080 |
|---|
| Symbol | |
|---|
| ID | 7137220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 80176 |
|---|
| End bp | 81456 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643528497 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002424594 |
|---|
| Protein GI | 218666904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0141112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGATA TTTTGGCGCA TGAAGCAATC CCGAATTATT TTGGTCGCCG TATGCGCGGT
ATGTTATCAA TGTCTACTAT GGTCCTCTGG ACAACAACGT TATTTTTACT ATCATTGGTT
TGCTATGGTC CATTTCGTTA TTATATGGCG AAGTTTGGCC TTGCTGAATT TGTGTATATA
CCCAAGATTC TGTTGTTCAT TATGATACCA TTCATGATAA GTTATATTGG GCGCGCTAGT
AAGGCTTTAA TTATTGGGGG CGCGATTGTA ACGCTGTTCG CTGGGTGGGG TATGGTAGAG
CTTCCTTCTC TTGATCAATC ATTATTTGGA GTGTGGGTGA TCATACCGTT GCTATATGGT
TTGTTGTCGG CGCACTATTT TTTTAATAAT ACGAACGCAT ACAAAAAGAT ATTTGTTATC
TTATTTATTA TAGCGTTGTC AGGGGTTCTT ATTAACGTTT TCGTGCAATA TCCGTGGGTT
GGTGCAAGCT TTAAAATTGG TGGGGAGGAA GTGCAAATTT CTCGGAGATG GTGGGCGTTT
GGGATCAGTA GGATTGGCGG ATTTTCCGGC GCCTCTTTCG ATGCAGCCAT ACAGATCATG
TTTTTTTCTG TCTGGCTGAT GTTCGTTATA AACAGCAACG CCATAAAAGT ATTGGTGTGG
ATTGCTTCTG GTGTAGGTGT TACGCTGACA ACAACAAAGG GTGTCCTTGG AGCATATTTG
ATATTAACTA CATTTTTTAT AAGCGGAAAA GTATTTGGCC ATAAATTGTT GTGGCGCCAA
ATCTGGGTGC TGCTTTTGTT GGCTAATCTC AGCCTGTTAG TTTTTTTGCC GTTGTCAACT
GTTATTATCC ATTATAATCC AACATTTCAT GGTTATTTTG ACCGGTTTAT CTTTGCGAGT
TTCGGCGATA GGCTGAACTA TACATGGCCA GCGTCATTCG GCCTTTTGCA CCATGATGTA
GGGTGGCTTT TCGGTCGGGG GATTGGCGGA ATCGGCACCC CGCAAACCTA TTTCGAGCCA
TCAAATGCGT TGCCCGCAGA TAATTTATAT GTTTATTTGG CGGTTGACCT TGGGCCGATT
CTCGCCGCCG TAATATTGAT TGCCATTTGC TTAAAGGCAG CCCGGTCCTT TTTGAGGACG
AATGATGCAT CTTTAATGTT TTCTATCCTT GTTTTTTTGA TAGCATACGG TATGGTGGTA
AATATCGTTG AAGCACCAAT ACTATCCCTT TTCTTTGGGG TAGTCATTGG TAGATTATTT
CAGAAGGACC GAGAGGTATG A
|
|---|
| Protein sequence | MDDILAHEAI PNYFGRRMRG MLSMSTMVLW TTTLFLLSLV CYGPFRYYMA KFGLAEFVYI
PKILLFIMIP FMISYIGRAS KALIIGGAIV TLFAGWGMVE LPSLDQSLFG VWVIIPLLYG
LLSAHYFFNN TNAYKKIFVI LFIIALSGVL INVFVQYPWV GASFKIGGEE VQISRRWWAF
GISRIGGFSG ASFDAAIQIM FFSVWLMFVI NSNAIKVLVW IASGVGVTLT TTKGVLGAYL
ILTTFFISGK VFGHKLLWRQ IWVLLLLANL SLLVFLPLST VIIHYNPTFH GYFDRFIFAS
FGDRLNYTWP ASFGLLHHDV GWLFGRGIGG IGTPQTYFEP SNALPADNLY VYLAVDLGPI
LAAVILIAIC LKAARSFLRT NDASLMFSIL VFLIAYGMVV NIVEAPILSL FFGVVIGRLF
QKDREV
|
|---|
| |