Gene AFE_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0070 
Symbol 
ID7135489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp70218 
End bp71036 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID643528487 
Producthypothetical protein 
Protein accessionYP_002424584 
Protein GI218666817 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCT GGCATCTTTA TCCCGTCCTT TCCTTACTAT GCCTGAGTCC CTTCGCACAG 
GCCGAGTCAA CCGGCGAGAA AGTGCTGCAG TTGCAACAGC AGATGGCGGT CATGCAGGGC
GAACTGAGCA GTCTGGTGGC GGTTCAACAG GCCAACAAGG GTAGCCAGAG CGCGCTGGCC
GACCTGCTCG GGCGCACCCA GCATCTGGAG CAGGAAGTGC GCGACCTGCG CGGCGAACTC
GACACCAAAA CTCACGCCCT ACAAACCCAG CAGCAGTCTA CGGCGGCTCA GGTACAGGCC
CTGACCGCGC AGCTTACGGG GGGCACGGCG GCAACCGCCA GCACCAGCAG CGCGCTGGGC
AGCGGTGTCG CCATCATCAG TCCGGCCGCG GCCGTCGCCT CCGCGGCGAG CAATACCTCC
GCGCCTGCGG TTCAGGGTCT GGGGCAAGCC GATTATCAAC GGGCTTTCGA TCTGCTGCGG
CAGGGCAAGT ACGGATCGGC CGTCACCGGA TTGCAGGGCT TCATTCAGAA ATACCCGCAG
AGCAGTCTGG TGCCCGACGC CTACTACTGG CTAGGGCAAG CGCAGTACGT GCTGGGCCAG
AACGATGCCG CCCTGAAGAG CCTCCATGTC GTGGAGGCGC AGTTCTCCCA GAGCAGTAAG
GCGCCGGAGG CCATGCTGCG GATGGCGGAA ATCTATCAGG CCATCGGCCA GTCCGGCAAA
GCCCGCACCG TTCTCAGCAA AATCATCAGC CAGTATCCGA GCACACCGTC GGCTCAGAAG
GCCGAGGCGC AGTTACAGGC GTTGTCCGCC GGAAAGTGA
 
Protein sequence
MKRWHLYPVL SLLCLSPFAQ AESTGEKVLQ LQQQMAVMQG ELSSLVAVQQ ANKGSQSALA 
DLLGRTQHLE QEVRDLRGEL DTKTHALQTQ QQSTAAQVQA LTAQLTGGTA ATASTSSALG
SGVAIISPAA AVASAASNTS APAVQGLGQA DYQRAFDLLR QGKYGSAVTG LQGFIQKYPQ
SSLVPDAYYW LGQAQYVLGQ NDAALKSLHV VEAQFSQSSK APEAMLRMAE IYQAIGQSGK
ARTVLSKIIS QYPSTPSAQK AEAQLQALSA GK