Gene AFE_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0067 
SymboltolB 
ID7135036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp67572 
End bp68840 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content65% 
IMG OID643528484 
Producttol-pal system beta propeller repeat protein TolB 
Protein accessionYP_002424581 
Protein GI218665098 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.518188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAC GCTTTTGGAC CCTGGCCATT TTTCTGCTGG CATGGGCCTT CGTTCTTCCC 
GCCCAGGCGG CGCTCACGGT GGAGATCACC AAGAATGTGG CCTCGGCACT GCCTATCGCC
ATTCCTTCCT TTGGTCCCGG CATAGCCGGG CAGCCATCCG TTGCCGAGGT GGTCCGTAAT
GACCTGCGCC ACAGTGGGTT GTTCCGGGTC ATCGACCCTG CGGGCTACCC CGCCGACCCC
CGCGCCCCCG GCGGCGTGAA GGCCGCGGAC TGGACAGCGG TAGGGGCCAC CGGCCTGGCC
GTGGGTTCCG TGGAACCGCG GAACGGCGGC TACGCGGTCA ACGTCTACGT CTACAATGTC
AGCACGGGGC AAGAACTCAC CGCCCACCGT TTCACCTGTT CGGCCGCCGA GTTGCATATG
ACCGCGCATC ACGTCGCGGA TGTCATCTAC CAGGCGTTCA CCGGCAAACC CGGCCCCTTC
GCCAGTCGGA TCGCCTATGT CCGGCAGACG GGTGCAAACT ACGAACTGCT GGTGGCAGAA
TCCGACGGCT GGAATCCGCA CCCCATCGTG CGCGGCCGCA TGCCGGTATT CTCCCCCGTC
TGGTCGCCGG ATAACCGGCG TCTGGCCTAT GTCACCTACG CCAACGCCCG CGCCGTGATC
TATGTCCAGG ATCTGGCTAC CGGACAGCGT CAGTCCATCG CCCCCGGTGG CGAGATCGTC
AGTGCTCCGG CCTTCTCGCC CAACGGGACG GAACTGGCCT ATGCCCGCTC CTCCGGTGGC
CACACCGAGC TTTACGTGGC GAACCTGCAG ACCGGGCAGC GCCGGCAATT GACCCATGAT
GACGCCATCA ACACCTCTCC CACCTGGTCG CCGGACGGCA GTCGGATCAT TTTCGTCTCT
GATCGTGCCG GTGGCCCGCA AATCTACGCG ATGAACGCGA GCGGCGGTGC GGCGCATCGT
CTGAGCTACG ACGGCAGCTA CAATGCCAGC CCGGTCTATT CGCCCGCGGG CAACGCGATT
GCTTTCATTC ATCGCACCAA CGGCGTCTAT GCCCTCGCGG TGATGAACCC GGACGGCAGC
GGCGTGCGCG TGCTGGATGC CCAGGGCAAT TGCGATCATC CGAGCTTCGC CGGCAACGGC
CAGATGATCC TCTACGGCAC TCAGCGCGGC GGGCGCAAGG TGCTGGCCGA GGTCAGCCTG
GACGGCAAGA CCATGGCCAT TCTGCACAGC AACGCGGGAG AAGACAGCCA ACCGGCCTGG
TCCCATTAA
 
Protein sequence
MAKRFWTLAI FLLAWAFVLP AQAALTVEIT KNVASALPIA IPSFGPGIAG QPSVAEVVRN 
DLRHSGLFRV IDPAGYPADP RAPGGVKAAD WTAVGATGLA VGSVEPRNGG YAVNVYVYNV
STGQELTAHR FTCSAAELHM TAHHVADVIY QAFTGKPGPF ASRIAYVRQT GANYELLVAE
SDGWNPHPIV RGRMPVFSPV WSPDNRRLAY VTYANARAVI YVQDLATGQR QSIAPGGEIV
SAPAFSPNGT ELAYARSSGG HTELYVANLQ TGQRRQLTHD DAINTSPTWS PDGSRIIFVS
DRAGGPQIYA MNASGGAAHR LSYDGSYNAS PVYSPAGNAI AFIHRTNGVY ALAVMNPDGS
GVRVLDAQGN CDHPSFAGNG QMILYGTQRG GRKVLAEVSL DGKTMAILHS NAGEDSQPAW
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