Gene AFE_0062 details

Gene Information

• Locus tag: AFE_0062
• Symbol: ruvB
• ID: 7135023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 64080
• End bp: 65102
• Gene Length: 1023 bp
• Protein Length: 340 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643528479
• Product: Holliday junction DNA helicase RuvB
• Protein accession: YP_002424576
• Protein GI: 218666868
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2255] Holliday junction resolvasome, helicase subunit
• TIGRFAM ID: [TIGR00635] Holliday junction DNA helicase, RuvB subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAGAG GCCCTCTCAA CCCCCAGGAA GCCCACAATG ATGCAGTAGA CCATGCCCTG 
CGTCCGCGCC GGCTGGCGGA GTACCTCGGG CAGGCCAAAC TGCGGGAGTC GCTGGGCCTG 
TATATCGATG CCGCCAGGGG ACGCAGCGAG GCGCTGGATC ATGTGCTGCT CTTCGGGCCG 
CCCGGACTCG GCAAAACCAC CCTGGCCCAC ATCATCGCTC AGGAGATGGG CGCGGGCCTC 
AAGGTCACTT CCGGCCCGGT GCTCGACAAG CCCGGCGACC TGGCCGCCAT CCTCACCAAC 
CTGCAACCCC ACGACGTACT CTTCGTCGAC GAGATTCACC GTCTCAGCCC GGTGGTGGAA 
GAAATTCTCT ACCCCGCGCT GGAGGACTAC GAGCTGGACA TCCTCATCGG CGAAGGGCCG 
GCGGCGCGCT CCATCAAAAT CAGCCTGCCG CCCTTCACCC TGATCGGCGC CACCACCCGC 
GCCGGCCTGC TGACCTCGCC GCTGCGCGAC CGCTTCGGCA TCAGTTTTCA CCTGGAGTTC 
TACAGCGACG CCGAGCTGAC CCAGATCGTC ACCCGCTCCG CCCGGATTCT CGGCACCCCC 
CAGGCTTTGG AAGGCGCGCA GGAAATCGCC CGACGCGCGC GCGGCACGCC GCGCATCGCC 
AACCGCCTGC TGCGTCGGGT GCGGGACTAC GCCCAGGTAC GGGGTAACGG CGAAATTGAC 
ATGGCGACGG CACAGGCGGC CCTGACCCTC ATGGAGGTGG ACCGGCATGG CTTCGATGGC 
CAGGATCGCA AGTTGCTCCA GGCCGTCATC TCCCGTTTCG CCGGCGGACC GGTGGGGGTG 
GAGAGTCTGG CGGCCGCCAT CGGCGAGGAG CGCGGCACCA TCGAAGATGT GCTGGAGCCC 
TTCCTGATCC AGCGCGGTTA TCTGATCCGC ACGCCGCGCG GGCGCTGCGC CACCGAGCTC 
AGCTATCTGG CCCTCGGCCT GCCTGCGCCC AGGGAGCCGG GGGGAGCGTC CGATGCCTGT 
TGA 

 

Protein sequence

MDRGPLNPQE AHNDAVDHAL RPRRLAEYLG QAKLRESLGL YIDAARGRSE ALDHVLLFGP 
PGLGKTTLAH IIAQEMGAGL KVTSGPVLDK PGDLAAILTN LQPHDVLFVD EIHRLSPVVE 
EILYPALEDY ELDILIGEGP AARSIKISLP PFTLIGATTR AGLLTSPLRD RFGISFHLEF 
YSDAELTQIV TRSARILGTP QALEGAQEIA RRARGTPRIA NRLLRRVRDY AQVRGNGEID 
MATAQAALTL MEVDRHGFDG QDRKLLQAVI SRFAGGPVGV ESLAAAIGEE RGTIEDVLEP 
FLIQRGYLIR TPRGRCATEL SYLALGLPAP REPGGASDAC