Gene AFE_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0055 
Symbol 
ID7134745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp58078 
End bp58335 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content64% 
IMG OID643528472 
Producthypothetical protein 
Protein accessionYP_002424569 
Protein GI218666395 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.130554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACTT ACGAGTATGT ATGCAAGGAT TGCGGGCACC ACTTGAGCGT CGAGCAGCGC 
ATGAGTGATC CCCGCCTGAC CGACTGCCCT CATTGCGGAA AGCCGGGGCT GGAGCGGCAA
CTGAGCGCAG GGGGCTTCGC CCTGAAGGGC TCCGGCTGGT ACCAGACCGA TTTCAAGGGT
GGCAGCAAGG CCGGCGAGAG CAAGCCGGAA GCAGCCGCTG TGCCTTCCTG TCCCGCCGGG
GGTTGTGCCT GTCATTGA
 
Protein sequence
MPTYEYVCKD CGHHLSVEQR MSDPRLTDCP HCGKPGLERQ LSAGGFALKG SGWYQTDFKG 
GSKAGESKPE AAAVPSCPAG GCACH