Gene AFE_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0050 
Symbol 
ID7137185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp53965 
End bp54777 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content59% 
IMG OID643528467 
ProductTat (twin-arginine translocation) pathway signal sequence domain protein 
Protein accessionYP_002424564 
Protein GI218666159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0115926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACG AGCAAAATCT GCTGAGCCGT CGCGACGCCA TGAAACATGC ATTGTGGGGT 
GCCGGAGCCC TGGCTGTGGG TGCCGTGGGT ACCCAGACGA GCGCCGTGGC GGCCGGCCTG
AGCGGGAATC CCGGCAACTT GTTGCCGACT GGCGCCAGGA GTCTGAAGGA ACTCGGCGAA
CGCCTGGCCA AAACGCCGCG GCGGCGCGAC TTCAAAACGG TTCCCATGAT CCTCACCAAA
CCCGACGAAT GGGATGATGC GGCGCTGAGG GAGATCATCC ATTACGCCGG TGGCCCCAAA
CAGGTCTGGG ATAATACCGA TGTTTCCAGT CCGTGGCTGA ACTTGATGCG CAACAGCATG
AATGTGCAGG TCTGGTCGTT CAGGCATCCG GATTTCCTCT GTGTATCGGC CACCCATGGC
AGCGCCCACT GGGCGCTGTA CGACGATTTC ATCTGGAACA AATATCTGGC GCAGATGACC
GGCGGAAAAT GGAAAGACAA TGAATGGATC AAAGAACCGC CGGCGGCGGC GGCCGACCCC
GCCAACTTTG AGAATCCCGA AGGAGTGTTC TCTCCGGGGG ACAACAGTGT CACGGTATTG
CAGCGTCGCG GTGCCGTTTT CCTGGGCTGT CACAACGGCA TCTGGGAAAT CACCGAAGGC
GTACTCAAGA AGGGCATCAA TCCCGATGGC CTCAGCCATG AACAGATGGC GGCCGAGTTT
ACCAACCATC TCATTCCCGG TGTCATCCTG ACGCCGGGGG TGGTAGGTAC GTTGCCGGAA
CTGCAGTTGG CCGGCTTTCA ATACGCAAAA TAG
 
Protein sequence
MSNEQNLLSR RDAMKHALWG AGALAVGAVG TQTSAVAAGL SGNPGNLLPT GARSLKELGE 
RLAKTPRRRD FKTVPMILTK PDEWDDAALR EIIHYAGGPK QVWDNTDVSS PWLNLMRNSM
NVQVWSFRHP DFLCVSATHG SAHWALYDDF IWNKYLAQMT GGKWKDNEWI KEPPAAAADP
ANFENPEGVF SPGDNSVTVL QRRGAVFLGC HNGIWEITEG VLKKGINPDG LSHEQMAAEF
TNHLIPGVIL TPGVVGTLPE LQLAGFQYAK