Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0048 |
Symbol | doxD_1 |
ID | 7136727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 51795 |
End bp | 52877 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643528465 |
Product | DoxD-like family protein |
Protein accession | YP_002424562 |
Protein GI | 218665682 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTAGTG CAACGAGCGT AAACGGCAGT ACATTTTCAG TGGACAGAGG ATGGCGCCTG GCGGCGATAG GGCTGCTCGC CGTGCGTTTT GTGCAGGGTT GGATTTACTG GGGCGGCGGC ACCAGACGGT TCATCTACGG CCCGCAAAAG CTGGATGCGT GGGGTGGCGG GCACTGGATG GCCTATAAGT TTCAGACGGC CATGCCGGGT GCCCTGCTGG GCACGGAGCA TCTCGTCTCC TTCCTGCTGC AGCATTTCGT TCTGCTCTAT GTCGGGGTCA TCGTCTTCAG CCTGGTGGAG CTATTTGCGG GCTTCATGCT CATCACCGGC CTGCTGACGC GCATCGCCGC CCTGACCACC ATCGGCTTGT CCTTCGTGCT GATGCTCCTG TTCGGTTGGC AGGGGGCTAC CTGCATAGAC GAATGGACCA TGGCCGCATC CAATTTCGCC ATGGGCGTGA CCCTCCTGCT GGTGGGCGGA GGCGCTTATT CCCTGGACAA CTGGCTCCTC GCGAAAAAGC CCGGCCTGGC CCAAAAAGGG TGGTTTCGCT GGATGGGCGG CAGTTTGCCG TTGCCCCTGA GCGATCAGGC CTACAAGAAA TTCGCGCTGG TGCTGTTCTG GATCGCCGTC GCTTTCATCG TCGGTACCTA CAGCTACTAT CGCGGCTCGG TGGTCACCCC TTTCCATGGC GGCCCCGTGA GCCCCTCCAA ACATCATTGG TCCCTCTCTA ACGGCCGCCT GCAAGGGGAC GGCACGGTGA CCTTCCATGC CTATGTGGAC GCGGGCACCC CCGAAGCACC ATCCAACGTG CTGCATGTCA CACTTGTCGA CCCCCGGAAT GGCAGTGTGG TCGAGGAGTG GGATAGCGCC AAGCTTGCCG CCTTGCCCAA AACGGCCTTG AAAAACGACT ATGATTATCA AAAAATTCAT ATCGGTAAAT ACGGGATCAC CGGCCCGGTG GGTTCCAAGG CTACCATTAT CCTGCCCCCA GCGGCGAGCG ATCTGAAGCT GCCGGCAGGT ACTTATACGC TCAAGCTGAA TTCGGTAAAT GGCAGCGTCT GGACCATACC CCTGCAACGC TGA
|
Protein sequence | MGSATSVNGS TFSVDRGWRL AAIGLLAVRF VQGWIYWGGG TRRFIYGPQK LDAWGGGHWM AYKFQTAMPG ALLGTEHLVS FLLQHFVLLY VGVIVFSLVE LFAGFMLITG LLTRIAALTT IGLSFVLMLL FGWQGATCID EWTMAASNFA MGVTLLLVGG GAYSLDNWLL AKKPGLAQKG WFRWMGGSLP LPLSDQAYKK FALVLFWIAV AFIVGTYSYY RGSVVTPFHG GPVSPSKHHW SLSNGRLQGD GTVTFHAYVD AGTPEAPSNV LHVTLVDPRN GSVVEEWDSA KLAALPKTAL KNDYDYQKIH IGKYGITGPV GSKATIILPP AASDLKLPAG TYTLKLNSVN GSVWTIPLQR
|
| |