Gene AFE_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0048 
SymboldoxD_1 
ID7136727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp51795 
End bp52877 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content60% 
IMG OID643528465 
ProductDoxD-like family protein 
Protein accessionYP_002424562 
Protein GI218665682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAGTG CAACGAGCGT AAACGGCAGT ACATTTTCAG TGGACAGAGG ATGGCGCCTG 
GCGGCGATAG GGCTGCTCGC CGTGCGTTTT GTGCAGGGTT GGATTTACTG GGGCGGCGGC
ACCAGACGGT TCATCTACGG CCCGCAAAAG CTGGATGCGT GGGGTGGCGG GCACTGGATG
GCCTATAAGT TTCAGACGGC CATGCCGGGT GCCCTGCTGG GCACGGAGCA TCTCGTCTCC
TTCCTGCTGC AGCATTTCGT TCTGCTCTAT GTCGGGGTCA TCGTCTTCAG CCTGGTGGAG
CTATTTGCGG GCTTCATGCT CATCACCGGC CTGCTGACGC GCATCGCCGC CCTGACCACC
ATCGGCTTGT CCTTCGTGCT GATGCTCCTG TTCGGTTGGC AGGGGGCTAC CTGCATAGAC
GAATGGACCA TGGCCGCATC CAATTTCGCC ATGGGCGTGA CCCTCCTGCT GGTGGGCGGA
GGCGCTTATT CCCTGGACAA CTGGCTCCTC GCGAAAAAGC CCGGCCTGGC CCAAAAAGGG
TGGTTTCGCT GGATGGGCGG CAGTTTGCCG TTGCCCCTGA GCGATCAGGC CTACAAGAAA
TTCGCGCTGG TGCTGTTCTG GATCGCCGTC GCTTTCATCG TCGGTACCTA CAGCTACTAT
CGCGGCTCGG TGGTCACCCC TTTCCATGGC GGCCCCGTGA GCCCCTCCAA ACATCATTGG
TCCCTCTCTA ACGGCCGCCT GCAAGGGGAC GGCACGGTGA CCTTCCATGC CTATGTGGAC
GCGGGCACCC CCGAAGCACC ATCCAACGTG CTGCATGTCA CACTTGTCGA CCCCCGGAAT
GGCAGTGTGG TCGAGGAGTG GGATAGCGCC AAGCTTGCCG CCTTGCCCAA AACGGCCTTG
AAAAACGACT ATGATTATCA AAAAATTCAT ATCGGTAAAT ACGGGATCAC CGGCCCGGTG
GGTTCCAAGG CTACCATTAT CCTGCCCCCA GCGGCGAGCG ATCTGAAGCT GCCGGCAGGT
ACTTATACGC TCAAGCTGAA TTCGGTAAAT GGCAGCGTCT GGACCATACC CCTGCAACGC
TGA
 
Protein sequence
MGSATSVNGS TFSVDRGWRL AAIGLLAVRF VQGWIYWGGG TRRFIYGPQK LDAWGGGHWM 
AYKFQTAMPG ALLGTEHLVS FLLQHFVLLY VGVIVFSLVE LFAGFMLITG LLTRIAALTT
IGLSFVLMLL FGWQGATCID EWTMAASNFA MGVTLLLVGG GAYSLDNWLL AKKPGLAQKG
WFRWMGGSLP LPLSDQAYKK FALVLFWIAV AFIVGTYSYY RGSVVTPFHG GPVSPSKHHW
SLSNGRLQGD GTVTFHAYVD AGTPEAPSNV LHVTLVDPRN GSVVEEWDSA KLAALPKTAL
KNDYDYQKIH IGKYGITGPV GSKATIILPP AASDLKLPAG TYTLKLNSVN GSVWTIPLQR