Gene AFE_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0045 
Symbol 
ID7136682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp50064 
End bp50711 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content55% 
IMG OID643528462 
Productsulfur/pyrite/thiosulfate/sulfide-induced protein 
Protein accessionYP_002424559 
Protein GI218665316 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.972938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGC GCCTAGCAAA CGCCGCAATT CCATTTGCCT TGGTCGGTAT GTTATTCGGG 
CTGTCGGTAT CGGTGGCCTC CGCCGACGAC AGTGGTAACC AAGCCGCACA ACAAGTGTTG 
AATGCACGCA TGGAGAAATT CTTTGCGGAT CAGAAACCCT TTCCCTACGG CACCTATCAG 
TATACGGACC GCAGCTTGTT ATTGGCGATC AGCAAGGATC CCAGCAAATA TGCGTTGATC 
GATATCCGGA CGCCAACCTA TCACGATTTT TTCTGCGGAG TGCATTCCAA CAAGCATGTC 
TGCACCGGAC GGGGCTGGCA ACGTATTTAC GGCTATGCAC AGGGCCATGT GCCAGGTGCT 
CAGAATATCC CGTATCTGAA CCTTCCTGCG GCCATCAAGA GCGACAGCAT TCCCAAAAAC 
AAGACCGTTA TCCTCATGTG TCCGACAGGC CAGCTATCCA ACCAGACGGC CGGAGTATTG 
CGCATGCTCG GTTATGACGC CTACGCCTTG CGTGGCGGGG TCAATGGCTG GAAAAAAGCA 
GGGTACCCCA TTGTCATCGG TAAAGAGCCG GGCACCATGG CGCAGGCGTG TCATCCCTGG 
CAGACGTGCT GGCGGCAGTT CCAGTATGAC AACCCGCAGG CGCATTGA
 
Protein sequence
MFKRLANAAI PFALVGMLFG LSVSVASADD SGNQAAQQVL NARMEKFFAD QKPFPYGTYQ 
YTDRSLLLAI SKDPSKYALI DIRTPTYHDF FCGVHSNKHV CTGRGWQRIY GYAQGHVPGA 
QNIPYLNLPA AIKSDSIPKN KTVILMCPTG QLSNQTAGVL RMLGYDAYAL RGGVNGWKKA 
GYPIVIGKEP GTMAQACHPW QTCWRQFQYD NPQAH