Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0027 |
Symbol | |
ID | 7134561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 29755 |
End bp | 31122 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643528444 |
Product | sigma-54 dependent transcriptional regulator/response regulator |
Protein accession | YP_002424541 |
Protein GI | 218666460 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATCCC AGAAAATCCT CATCGTCGAG GACGAAAAAA ATCTGCGTAG CGTACTCGCA GCCACCCTGG AGGCTGAAGG CTTCTCGACT GCACAAACAG AAAGTGCGGA GGACGCCCTG GCCATCATGG CCAGGGAACT CCCCGTCCTG GTCCTTACAG ACCAGCGCCT GCCAGGGATG AGCGGTACCG AACTGCTGGC ACGCATCAAG GAGCGCTGGC CCAGAACACC TGTGCTGATT GCCACGGCCT ACGGTGAAAT CGAACAGGCT GTGCAAGCTA TCAAGGCCGG GGCGGAGCAT TACCTGACCA AGCCGGTGGA TGAAGGGGAG CTCGTCGCCA TCATTCGCCA GGCGTTGAGT TGCCGGGGTC ACACCAACCC GCCACGCAGC CAGGACTTGC CGCGCCACGG CATTATCGGG GAGAGTCCAG GCACACTCGA AATTCTGGAG ATGATAAATC TCGTCGCGCC CGCCCCTTCC AATGTTCTTA TTACCGGAGA GTCAGGAACC GGCAAAGAGA TGGTTGCCAG GGGGTTGCAT GTGGCGTCCC CCCGTGCCCA TGCGCCTTTT CTTGCATTCA ACTGTGGTGC CATTCCCCTG GATCTGGTGG AAAGCGAAAT TTTTGGTCAC GAGAAAGGCG CCTTCACCGG TGCGGTGCGG TCTCAGGCAG GGAAATTGGA AATGGCGGGC TCCGGAACCC TCTTTCTGGA CGAAGTGGGT GACATGCCCC TGGCTATGCA GGTCAAGTTG TTACGCACCT TGCAGGAGCG GGAATATACC CGCCTCGGCG GGAACCAACC CCTGCGTCTC GCGGCTCGTA TCATCGCTGC AACCCATGTG GACCTCGCCA AGGCGGTGGA GGCAGGCAGT TTTCGGGAAG ACCTGTATTA TCGGTTGAAT GTCATCCCGT TGCACATCCC GCCGCTGCGG GAGCGGCGGG AGGATGTCGC GCCCCTCGTC CATCATTTTT TGCGGCGTGT GTGCACAGAG TTGGGGCGGC CTGAAGTAGA CATAGCGACT GCGGCGTTAG CTGCCATGGA GGCCTATTCG TGGCCCGGCA ACATTCGCCA GCTCGAGAAT ATCGTCGAGC GTTTGGTGGT GCTGAATCGG GGGGGCACCA TACTTGCCGC CGATCTCCCG AACGAGATGC GTACCACGGA AACAGAGAGA ATACGCCCCT TTGGGGGGGC TTATGATCTC CACGCCGTAG AGCGCGAGGC AGTCGTGTCG GCCCTGAACA AGGCGCAATC CAACAAGAGT CAGGCCGCAC TGTTGCTTGG TATCAGCCGT AAGCAACTGC ACACCCGCAT GAAAAATCTC GGACTGATCG TCGACCGTGA AGATGTGCCG GGCGGCGAGA AGCTATAA
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Protein sequence | MRSQKILIVE DEKNLRSVLA ATLEAEGFST AQTESAEDAL AIMARELPVL VLTDQRLPGM SGTELLARIK ERWPRTPVLI ATAYGEIEQA VQAIKAGAEH YLTKPVDEGE LVAIIRQALS CRGHTNPPRS QDLPRHGIIG ESPGTLEILE MINLVAPAPS NVLITGESGT GKEMVARGLH VASPRAHAPF LAFNCGAIPL DLVESEIFGH EKGAFTGAVR SQAGKLEMAG SGTLFLDEVG DMPLAMQVKL LRTLQEREYT RLGGNQPLRL AARIIAATHV DLAKAVEAGS FREDLYYRLN VIPLHIPPLR ERREDVAPLV HHFLRRVCTE LGRPEVDIAT AALAAMEAYS WPGNIRQLEN IVERLVVLNR GGTILAADLP NEMRTTETER IRPFGGAYDL HAVEREAVVS ALNKAQSNKS QAALLLGISR KQLHTRMKNL GLIVDREDVP GGEKL
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