Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0024 |
Symbol | ntrX |
ID | 7134801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 26385 |
End bp | 27791 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643528441 |
Product | nitrogen assimilation regulatory protein NtrX, putative |
Protein accession | YP_002424538 |
Protein GI | 218665148 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGATG CACGATTGAA TATTCTGGTG GTAGATGACG AACCCGATAT CTGCGCGACC CTGGCAGAAA TTCTGGAGGA CGAAGGCTAC GGCGTGCATA CCGCCGGTAG TGCGGAAGCG GCCGAAGTGC TGTTGCGCGA GCAGATGGTG GACCTCGTAC TCCTCGATAT CTGGATGCCG GGTGAGGATG GCGTCAGCCT CTTGCGACGC TGGGCCGAAA CGGGTCTGGC GCAGCCGGTG GTGATGATGT CCGGGCACGC CACCATCGAA ACGGCGGTGC AGGCGACCAA GCTGGGCGCC TATGACTTCA TCGAAAAGCC ACTGTCGTTG GACAAGACCC TGCTTACCGT CACCCATGCC CTGGAATCCA GCCGCTTGCA GCGCGAGAAC CGGGATCTGC GTGCGCAGGC GGGTTGGGTG GAGCGACCGA GCGGTGACAG TCCGGCCATC CGCCAGTTCC GCGAACAGTT GCAGCGGGTG GCGGCGGTGG ATTCCTGGGC CTTGCTGCTG GGCGAGCCGG GCAGCGGCAA GGAAGTGGCC GCGCGTTATC TGCACCGACG AAGCCGGCGG GCACAGGGGC CTTTCGTGGA TCTGCGTGCC GCCGCCATCG CCCGCCCCAA TGTGGCGGTC GAACTGTTCG GCAGCGAGGA GCATGGCAAG CTGACCCGCG GGCGTCTGGA AGTCGCCCAT GGCGGCACGC TCTTCATCGA CGAAATTGCC GATATGGATC TGGAAACTCA GGCGCGCCTG TTCTCGGCAC TGCAGGAGCG GCGCATCATC CGGGTGGGCG GGACGACGCC CGTGCCCGTG GATGTGCGCG TTATCGCCGG GAGTGCGCAG GATCTGGCGC ACGCGGTGCA GAGCGGGCAA TTTCGCAGCG ATCTCTACTA CCGTCTCAGC GCCCTGCCCC TGAAGGTGCC GCCGCTGTCG GCGCGGAGTG TGGATATTCC GGTGCTCATA GAAGAGTTCG TACGCTTTTA TGGCGCTCGC GATGGTCTGG CGCCGCGCCG TTTTGCCCCG GAAACCCTGG AGGTGCTGCG GCATTATCCA TGGCCGGGCA ATATCCGGGA ATTGCAGAAC CTGGTGGAAC GCCTGCTGAT TCTGGCGGAA GGCCCGGAGA TCAGCGCGGA AGAGGTGGAG GGCGCCCTGG GACTGGATAA TCGTCTCGTC CTCGCCAACA GCAATTTCGA CGGGGAAGAT TTCGGCGGTA CCCTGAAGCG CGCGCGGGAG CGCTTCGAGC GCGCCTTCCT GGAGTACCAT CTGGCGCGTA ACGAGTGGAA TATCGCGCGG ACGGCGGAAG TGGTAGGGCT GGAGCGCACA CATCTCTATC GCAAGCTGAA GAACCTGAGT ATCGCCCTGA AGGGCGAGCG GCGGGCGGGC GAGGATGGGG ATGAGGGGGA GGGGTGA
|
Protein sequence | MEDARLNILV VDDEPDICAT LAEILEDEGY GVHTAGSAEA AEVLLREQMV DLVLLDIWMP GEDGVSLLRR WAETGLAQPV VMMSGHATIE TAVQATKLGA YDFIEKPLSL DKTLLTVTHA LESSRLQREN RDLRAQAGWV ERPSGDSPAI RQFREQLQRV AAVDSWALLL GEPGSGKEVA ARYLHRRSRR AQGPFVDLRA AAIARPNVAV ELFGSEEHGK LTRGRLEVAH GGTLFIDEIA DMDLETQARL FSALQERRII RVGGTTPVPV DVRVIAGSAQ DLAHAVQSGQ FRSDLYYRLS ALPLKVPPLS ARSVDIPVLI EEFVRFYGAR DGLAPRRFAP ETLEVLRHYP WPGNIRELQN LVERLLILAE GPEISAEEVE GALGLDNRLV LANSNFDGED FGGTLKRARE RFERAFLEYH LARNEWNIAR TAEVVGLERT HLYRKLKNLS IALKGERRAG EDGDEGEG
|
| |