Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0006 |
Symbol | |
ID | 7137108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 8911 |
End bp | 9654 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643528424 |
Product | pilus chaperone protein, putative |
Protein accession | YP_002424521 |
Protein GI | 218668121 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0451749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAGCG GTGCTGCAAA TATCCGGCGC CTTATTGTCG GCGTCACGAG TATATTTATT ATCTCGTTTG CCGTCGGCAT AGCCAGCGCA GTATCCCTGA CCGTGCTGCC GGTCATCATT CAGATGGCGC CCGGGCAGAA GGCAACGACG TTGACGGTCA TCAACCACGG TAACCGCGAG ATCGCCTTTC AGGTTCGCAC CTTCGCCTGG ACACAAGTGT CTGGCCACAA CAAATTGACG CCCACCGCCG AATTGCTGGC CAGTCCACCC CTTGGCACCC TTGCGCCAGG TGGTCGCCAG ATTATTCGCA TGGTGTTGCG CCGACCCCCA CAGGGAAGGG AGGCCAGTTA CCGAATCCTG CTGGATGAAA TCCCGCCGCC AGCGGCGCCC GGGATGGTCC GGATCGCACT GCGTATGTCG ATCCCGATCT TTGCCGAGCC CCAGACTCGG GTTGCGCCCC ATGTGCTATG GCAGGTGGAA AGACGCAACG GACAGACTTT TCTGGTCGGT ATTAATGACG GTACACGCCA CGAGACTCTC CGCGACATCA AACTCCAGGC CCCTGGCGGG GGCACGCTGA AAGTCGAGTC CAATATCAAC CCTTATATCT TGGCGGGGGC CACAATGCGC TGGCACATCG TCACACCGTC CTCTCCACTG GCCCCTGGCG CAGTCCTGCA ACTAACGGCA CGCACCAATA CCGGGCATAT TGACCAGTCG GTCCGGGTTG TTGGCAGTCC ATGA
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Protein sequence | MWSGAANIRR LIVGVTSIFI ISFAVGIASA VSLTVLPVII QMAPGQKATT LTVINHGNRE IAFQVRTFAW TQVSGHNKLT PTAELLASPP LGTLAPGGRQ IIRMVLRRPP QGREASYRIL LDEIPPPAAP GMVRIALRMS IPIFAEPQTR VAPHVLWQVE RRNGQTFLVG INDGTRHETL RDIKLQAPGG GTLKVESNIN PYILAGATMR WHIVTPSSPL APGAVLQLTA RTNTGHIDQS VRVVGSP
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