Gene AFE_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0006 
Symbol 
ID7137108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp8911 
End bp9654 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID643528424 
Productpilus chaperone protein, putative 
Protein accessionYP_002424521 
Protein GI218668121 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0451749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAGCG GTGCTGCAAA TATCCGGCGC CTTATTGTCG GCGTCACGAG TATATTTATT 
ATCTCGTTTG CCGTCGGCAT AGCCAGCGCA GTATCCCTGA CCGTGCTGCC GGTCATCATT
CAGATGGCGC CCGGGCAGAA GGCAACGACG TTGACGGTCA TCAACCACGG TAACCGCGAG
ATCGCCTTTC AGGTTCGCAC CTTCGCCTGG ACACAAGTGT CTGGCCACAA CAAATTGACG
CCCACCGCCG AATTGCTGGC CAGTCCACCC CTTGGCACCC TTGCGCCAGG TGGTCGCCAG
ATTATTCGCA TGGTGTTGCG CCGACCCCCA CAGGGAAGGG AGGCCAGTTA CCGAATCCTG
CTGGATGAAA TCCCGCCGCC AGCGGCGCCC GGGATGGTCC GGATCGCACT GCGTATGTCG
ATCCCGATCT TTGCCGAGCC CCAGACTCGG GTTGCGCCCC ATGTGCTATG GCAGGTGGAA
AGACGCAACG GACAGACTTT TCTGGTCGGT ATTAATGACG GTACACGCCA CGAGACTCTC
CGCGACATCA AACTCCAGGC CCCTGGCGGG GGCACGCTGA AAGTCGAGTC CAATATCAAC
CCTTATATCT TGGCGGGGGC CACAATGCGC TGGCACATCG TCACACCGTC CTCTCCACTG
GCCCCTGGCG CAGTCCTGCA ACTAACGGCA CGCACCAATA CCGGGCATAT TGACCAGTCG
GTCCGGGTTG TTGGCAGTCC ATGA
 
Protein sequence
MWSGAANIRR LIVGVTSIFI ISFAVGIASA VSLTVLPVII QMAPGQKATT LTVINHGNRE 
IAFQVRTFAW TQVSGHNKLT PTAELLASPP LGTLAPGGRQ IIRMVLRRPP QGREASYRIL
LDEIPPPAAP GMVRIALRMS IPIFAEPQTR VAPHVLWQVE RRNGQTFLVG INDGTRHETL
RDIKLQAPGG GTLKVESNIN PYILAGATMR WHIVTPSSPL APGAVLQLTA RTNTGHIDQS
VRVVGSP