Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0547 |
Symbol | |
ID | 7296826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 626973 |
End bp | 628205 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643593341 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002490970 |
Protein GI | 220915666 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCCT CCCTCCGCTC CCCTCGCGCC GCCACGCGGC GCGCTCACGG CCTCCTTTTC GGCAAGCGCG CGCTCGCGCT CGCCGCGCTC GCGCTCGTGG CCGCCGGCTG CGGCAAGAAG CCGGAGGCGC GCCCCCCCGG CCCGGTCGAG GTCGGCGTGA TCACCGTCTC CCCGCAGGCG GTGACGCTCA CCACCGAGCT CCCCGGCCGC GTCTCCGCGT TCAAGGTCGC CGAGGTCCGC GCCCGCGTGA ACGGCATCGT GCTGAAGCGC CTGTTCACCG AGGGCAGCGA CGTGAAGCAG GGCCAGCCGC TGTTCAAGAT CGATCCGGCG CCCTACCAGG CCGCGCTCGA CAGCGCGCGG GCGCAGCTCG CCCGCGCCGA CGCGACGCTC GCGTCGGCCA AGCTCACCTC CGAGCGCTAC ACCGAGCTCG TCGCCGCGAA CGCGGTGAGC CGGCAGGAGC ACGAGGACGC CGTCGCCGCG CTGAAGAAGG CCGAGGCCGA CGTCGCCGCC GGCAAGGCCG CGGTGGACGC CGCCCGCATC AACCTCGGCT ACACCACCGT CACCTCGCCG GTGAGCGGCC GGATCGGCCG CTCGGGGGTC ACCGAGGGCG CCTACGTCCA GGCCGCGCAG GCCACGCTGC TCGCGACCGT GCAGCAGCTC GACCCGGTCT ACGTGGACGT GACGCAGTCC AGCGCCGAGC TGCTCCGGAT GCGGCGCGAT CTCGAGGCCG GCAAGCTCCA GTCCGCCGGC GCCGGCAAGG CGAAGGTCGC GCTCACCACC GAGGATGGCC GCGAGTACGG CCTCCCCGGC ACGCTGCAGT TCGCCGACGT CACCGTGGAT CCCGGCACTG GCTCGGTGGC GCTGCGCGCG ATCTTCCCGA ACCCGCGCGC CGAGCTGCTC CCCGGCACCT ACGTGCGGGC GCGCCTGGCC GAGGGCGTGA ACCCGGCGGC GCTTCTCGTC CCCCAGCGCG CCGTCGCCCG CAACAACAAG GGCGAGCCCA CGGCGCTGAT CGTCGCCGGC GGCAAGGTCG AGCTGCGCAA CCTGGTCACC GAGCGCGTCA TCGGCGACGC GTGGCTCGTG ACCTCCGGCG TGAAGCCCGG CGAGCAGGTG ATCGTCGAGG GCCTCCAGAA GGTGCGCCCG GGCGCCCCCG TCAACCCGGT CCCGGCCGGC GGCGCGAAGC AGGCGAACGC CGCGACCCCG GGCCAGCAGG CCCCGGCGGG CGCGGCCCGC TGA
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Protein sequence | MNPSLRSPRA ATRRAHGLLF GKRALALAAL ALVAAGCGKK PEARPPGPVE VGVITVSPQA VTLTTELPGR VSAFKVAEVR ARVNGIVLKR LFTEGSDVKQ GQPLFKIDPA PYQAALDSAR AQLARADATL ASAKLTSERY TELVAANAVS RQEHEDAVAA LKKAEADVAA GKAAVDAARI NLGYTTVTSP VSGRIGRSGV TEGAYVQAAQ ATLLATVQQL DPVYVDVTQS SAELLRMRRD LEAGKLQSAG AGKAKVALTT EDGREYGLPG TLQFADVTVD PGTGSVALRA IFPNPRAELL PGTYVRARLA EGVNPAALLV PQRAVARNNK GEPTALIVAG GKVELRNLVT ERVIGDAWLV TSGVKPGEQV IVEGLQKVRP GAPVNPVPAG GAKQANAATP GQQAPAGAAR
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